Gene: Ah.01g020480

General Information

Structural Information

  • Species Amaranthus hybridus
  • Gene Identifier Ah.01g020480
  • Transcript Identifier Ah.01g020480-v1.1.a1
  • Gene Type Coding gene
  • Location AmaHy_arrow1_Scaffold_1 : 32670118-32676958 : positive

Gene Family Information

  • ID HOM05D006093
  • #Genes/#Species 130/97
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Ah.01g020480-v1.1.a1

Descriptions

  • Description Formamidopyrimidine-DNA glycosylase (Fapy-DNA glycosylase) (EC 3.2.2.23) (EC 4.2.99.18) (DNA-(apurinic or apyrimidinic site) lyase FPG1) (Formamidopyrimidine-DNA glycosylase 1) (AtFPG-1) (Formamidopyrimidine-DNA glycosylase 2) (AtFPG-2) (Protein MutM homolog 1) (AtMMH-1) (Protein MutM homolog 2) (AtMMH-2)
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006284
IEA
InterProbase-excision repair
GO:0006281
ISO
PLAZA Integrative OrthologyDNA repair AT1G52500
GO:0006979
ISO
PLAZA Integrative Orthologyresponse to oxidative stress AT1G52500

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003684
IEA
InterProdamaged DNA binding
GO:0003906
IEA
InterProDNA-(apurinic or apyrimidinic site) endonuclease activity
GO:0008270
IEA
InterProzinc ion binding
GO:0016799
IEA
InterProhydrolase activity, hydrolyzing N-glycosyl compounds
GO:0003676
IEA
InterPronucleic acid binding
GO:0019104
IEA
InterProDNA N-glycosylase activity
GO:0008534
ISO
PLAZA Homology (enrichment)oxidized purine nucleobase lesion DNA N-glycosylase activity HOM05D006093

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR015886 DNA glycosylase/AP lyase, H2TH DNA-binding
IPR035937 MutM-like, N-terminal
IPR010979 Ribosomal protein S13-like, H2TH
IPR012319 Formamidopyrimidine-DNA glycosylase, catalytic domain
Mapman id Description
14.5.1 DNA damage response.base excision repair (BER).formamidopyrimidine-DNA glycosylase (FPG1)