Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A06p06970 Brassica napus
A08p34030 Brassica napus
Aa31LG1G4600 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_228.1260 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_344.1372 Anthoceros agrestis
Actinidia01633 Actinidia chinensis
Actinidia26193 Actinidia chinensis
AL1G21050 Arabidopsis lyrata
Aqoxy6G00043 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.7BJ6UQ Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.AE80VE Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.V0D4VX Arachis hypogaea
AT1G10320 Arabidopsis thaliana
ATR1089G094 Amborella trichopoda
Atru.chr3.2070 Acer truncatum
Atru.chr6.324 Acer truncatum
AUR62021311 Chenopodium quinoa
AUR62033228 Chenopodium quinoa
AUR62043443 Chenopodium quinoa
BcaC05g24900 Brassica carinata
BcaNung05166 Brassica carinata
BcaNung05168 Brassica carinata
BcaNung05228 Brassica carinata
C05p08470 Brassica napus
C08p13580 Brassica napus
CAN.G855.47 Capsicum annuum
CANSAT01G3012 Cannabis sativa
CARHR009050 Cardamine hirsuta
CARHR010450 Cardamine hirsuta
Carub.0001s0973 Capsella rubella
Carub.0001s0974 Capsella rubella
Ca_00027_v3 Cicer arietinum L.
CBR_g28817 Chara braunii
Cc02_g23540 Coffea canephora
CDE05G0469 Ceratophyllum demersum
CDE05G0691 Ceratophyllum demersum
Cfa004448 Carpinus fangiana
Ciclev10003415m.g Citrus clementina
Ciclev10010745m.g Citrus clementina
Ciclev10013954m.g Citrus clementina
Ciclev10024033m.g Citrus clementina
Ciclev10029935m.g Citrus clementina
Ciclev10030365m.g Citrus clementina
CiPaw.05G001900 Carya illinoinensis
ClCG10G007430 Citrullus lanatus
ClCG10G007450 Citrullus lanatus
COL.COLO4_22855 Corchorus olitorius
Cpa.g.sc173.41 Carica papaya
CsaV3_3G006640 Cucumis sativus L.
CSS0030434 Camellia sinensis var. sinensis
DCAR_001720 Daucus carota
Dinv29628 Davidia involucrata
Duzib160G0493 Durio zibethinus
Duzib235G0168 Durio zibethinus
ECA240G4044 Erigeron canadensis
ECA240G4408 Erigeron canadensis
Eucgr.G00080 Eucalyptus grandis
Eucgr.G00321 Eucalyptus grandis
FAN08G0588 Fragaria x ananassa
FAN18G0255 Fragaria x ananassa
FvH4_5g28020 Fragaria vesca
Glyma.08G162800 Glycine max
Glyma.15G244700 Glycine max
Gohir.A03G081600 Gossypium hirsutum
Gohir.D02G105600 Gossypium hirsutum
Gohir.D02G105700 Gossypium hirsutum
Gorai.005G120000 Gossypium raimondii
Gorai.005G120100 Gossypium raimondii
GSVIVG01023150001 Vitis vinifera
HanXRQChr12g0381671 Helianthus annuus
HanXRQChr13g0409931 Helianthus annuus
Haze_09988 Corylus avellana
HPP92_011424 Vanilla planifolia
HPP92_011425 Vanilla planifolia
HPP92_011434 Vanilla planifolia
Hund00892 Selenicereus undatus
Lalb_Chr20g0123811 Lupinus albus
Lalb_Chr20g0123821 Lupinus albus
Lj5A282T77 Lonicera japonica
Lj5A282T78 Lonicera japonica
Lj5g0025119 Lotus japonicus
Lsat_1_v5_gn_9_121820 Lactuca sativa
Manes.10G111800 Manihot esculenta
Mapoly0079s0042 Marchantia polymorpha
MBI19_g32709_MAGBIO Magnolia biondii
MD05G1262900 Malus domestica
MD05G1263000 Malus domestica
MD15G1442200 Malus domestica
MD15G1442300 Malus domestica
Medtr2g005450 Medicago truncatula
MELO3C016469.2 Cucumis melo
Migut.B00725 Erythranthe guttata
Nitab4.5_0004668g0060 Nicotiana tabacum
Nitab4.5_0008306g0010 Nicotiana tabacum
Nn5g27250 Nelumbo nucifera
Oeu043612.1 Olea europaea
Os02g0557500 Oryza sativa ssp. japonica
Peaxi162Scf00011g01832 Petunia axillaris
PGR042G3242 Punica granatum
PGSC0003DMG400020705 Solanum tuberosum
Phvul.006G221300 Phaseolus vulgaris
Potri.004G228600 Populus trichocarpa
Pp3c3_25240 Physcomitrium patens
Prupe.1G585000 Prunus persica
Psat1g223160 Pisum sativum
PSO063G1559 Papaver somniferum
PSO421G0485 Papaver somniferum
QL02p103277 Quercus lobata
RcHm_v2.0_Chr6g0272511 Rosa chinensis
RcHm_v2.0_Chr6g0272531 Rosa chinensis
RcHm_v2.0_Chr6g0289931 Rosa chinensis
RcHm_v2.0_Chr6g0289941 Rosa chinensis
RcHm_v2.0_Chr7g0221391 Rosa chinensis
RcHm_v2.0_Chr7g0221411 Rosa chinensis
Rhsim05G0115600 Rhododendron simsii
Sc06g0007800 Simmondsia chinensis
Sed0005680 Sechium edule
SEGI_25881 Sequoiadendron giganteum
SGA_v2.0_scaffold131G34405 Striga asiatica
SMO143G0278 Selaginella moellendorffii
SMO307G0091 Selaginella moellendorffii
SMO364G0945 Selaginella moellendorffii
Solyc01g103090.4 Solanum lycopersicum
Sopen01g045500 Solanum pennellii
Sopen01g045510 Solanum pennellii
Sp1g08920 Schrenkiella parvula
TAR628G1213 Trochodendron aralioides
THA.LOC104810192 Tarenaya hassleriana
Thecc.06G017100 Theobroma cacao
Thhalv10009354m.g Eutrema salsugineum
TPR.G2096 Trifolium pratense
TWI59G0191 Tripterygium wilfordii
unitig_578.g15961 Utricularia gibba
vmacro19831 Vaccinium macrocarpon
VMungo0540G1910 Vigna mungo
Zm00001eb243910 Zea mays

User provided reference genes

Program Settings