Gene: A08p34030
General Information
Structural Information
- Species Brassica napus
- Gene Identifier A08p34030
- Transcript Identifier A08p34030
- Gene Type Coding gene
- Location A08 : 24810779-24819616 : positive
Gene Family Information
- ID HOM05D000904
- #Genes/#Species 662/100
- Phylogenetic origin
- ID ORTHO05D006931
- #Genes/#Species 136/88
- Phylogenetic origin
Gene Duplication Information
- Block Duplication Block duplicate
Labels
Identifiers
- tid A08p34030.1_BnaDAR
- v5 BnaA08g25830D
- single_cell_id A08p34030.1-BnaDAR
- ensembl GSBRNA2T00015087001
Descriptions
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0000398 | IEA | InterPro | mRNA splicing, via spliceosome |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0046872 | IEA | InterPro | metal ion binding | |
| GO:0003723 | IEA | InterPro | RNA binding | |
| GO:0003676 | IEA | InterPro | nucleic acid binding | |
| GO:0016491 | IEA | InterPro | oxidoreductase activity | |
| GO:0005515 | IEA | InterPro | protein binding |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0089701 | IEA | InterPro | U2AF complex |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| InterPro | Description |
|---|---|
| IPR000571 | Zinc finger, CCCH-type |
| IPR009145 | U2 auxiliary factor small subunit |
| IPR035979 | RNA-binding domain superfamily |
| IPR003954 | RNA recognition motif domain, eukaryote |
| IPR036291 | NAD(P)-binding domain superfamily |
| IPR036770 | Ankyrin repeat-containing domain superfamily |
| IPR002347 | Short-chain dehydrogenase/reductase SDR |
| IPR020683 | Ankyrin repeat-containing domain |
| IPR012677 | Nucleotide-binding alpha-beta plait domain superfamily |
| IPR026961 | PGG domain |
| IPR002110 | Ankyrin repeat |
| Mapman id | Description |
|---|---|
| 16.2.4.3 | RNA processing.pre-mRNA splicing.U12-type-intron-specific minor spliceosome.splicing factor (RGH3) |