Gene: Zm00001eb243910

General Information

Structural Information

  • Species Zea mays
  • Gene Identifier Zm00001eb243910
  • Transcript Identifier Zm00001eb243910_T001
  • Gene Type Coding gene
  • Location 5 : 177127705-177133773 : negative

Gene Family Information

  • ID HOM05D000904
  • #Genes/#Species 662/100
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Zm00001eb243910_T001
  • pid Zm00001eb243910_P001
  • uniprot F5CEP4
  • uniprot A0A1D6HAP6
  • uniprot A0A1D6HAP7
  • uniprot G9J129
  • uniprot A0A1D6HAP9
  • uniprot G9J114
  • uniprot A0A1D6HAP4
  • uniprot A0A1D6HAP5
  • uniprot G9J133
  • uniprot A0A1D6HAQ0
  • uniprot G9J132
  • uniprot G9J120
  • uniprot G9J130
  • uniprot A0A3L6EMP0
  • entrez 100857066
  • refseq NP_001241852.1
  • refseq NM_001254923.1
  • V4_identifier Zm00001d016836

Descriptions

  • Description Zm00001e014831
  • Description rough endosperm3
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0000398
IBA
IEA
GOA DatabasemRNA splicing, via spliceosome
GO:0000398
IEA
InterPromRNA splicing, via spliceosome

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0046872
IEA
GOA Databasemetal ion binding
GO:0046872
IEA
InterPrometal ion binding
GO:0003723
IEA
GOA DatabaseRNA binding
GO:0003723
IEA
InterProRNA binding
GO:0003676
IEA
GOA Databasenucleic acid binding
GO:0003676
IEA
InterPronucleic acid binding
GO:0030628
IBA
GOA Databasepre-mRNA 3'-splice site binding

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0089701
IBA
IEA
GOA DatabaseU2AF complex
GO:0089701
IEA
InterProU2AF complex
GO:0005681
IBA
GOA Databasespliceosomal complex

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR035979 RNA-binding domain superfamily
IPR012677 Nucleotide-binding alpha-beta plait domain superfamily
IPR000571 Zinc finger, CCCH-type
IPR000504 RNA recognition motif domain
IPR009145 U2 auxiliary factor small subunit
IPR003954 RNA recognition motif domain, eukaryote
Mapman id Description
16.2.4.3 RNA processing.pre-mRNA splicing.U12-type-intron-specific minor spliceosome.splicing factor (RGH3)