Gene: SGA_v2.0_scaffold131G34405

General Information

Structural Information

  • Species Striga asiatica
  • Gene Identifier SGA_v2.0_scaffold131G34405
  • Transcript Identifier SGA_v2.0_scaffold131T34405
  • Gene Type Coding gene
  • Location scaffold131 : 235580-244559 : positive

Gene Family Information

  • ID HOM05D000904
  • #Genes/#Species 662/100
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

Descriptions

  • product RGH3 splicing factor
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0000398
IEA
InterPromRNA splicing, via spliceosome

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003676
IEA
InterPronucleic acid binding
GO:0046872
IEA
InterPrometal ion binding
GO:0003723
IEA
InterProRNA binding

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0089701
IEA
InterProU2AF complex

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR000504 RNA recognition motif domain
IPR035979 RNA-binding domain superfamily
IPR000571 Zinc finger, CCCH-type
IPR003954 RNA recognition motif domain, eukaryote
IPR009145 U2 auxiliary factor small subunit
IPR012677 Nucleotide-binding alpha-beta plait domain superfamily
Mapman id Description
16.2.4.3 RNA processing.pre-mRNA splicing.U12-type-intron-specific minor spliceosome.splicing factor (RGH3)