Gene: HPP92_011424

General Information

Structural Information

  • Species Vanilla planifolia
  • Gene Identifier HPP92_011424
  • Transcript Identifier Vpl05Ag11424.1
  • Gene Type Coding gene
  • Location CM028154.1 : 27067328-27074976 : negative

Gene Family Information

  • ID HOM05D000904
  • #Genes/#Species 662/100
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Vpl05Ag11424.1
  • pid KAG0480566.1

Descriptions

  • Description U2 snrnp auxiliary factor, small subunit, putative *-*
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0000398
IEA
InterPromRNA splicing, via spliceosome

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0046872
IEA
InterPrometal ion binding
GO:0003723
IEA
InterProRNA binding
GO:0003676
IEA
InterPronucleic acid binding

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0089701
IEA
InterProU2AF complex

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR000571 Zinc finger, CCCH-type
IPR009145 U2 auxiliary factor small subunit
IPR035979 RNA-binding domain superfamily
IPR012677 Nucleotide-binding alpha-beta plait domain superfamily
Mapman id Description
35.1 not assigned.annotated