Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A02p30660 Brassica napus
Aa31LG9G5970 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_117.2896 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_228.2967 Anthoceros agrestis
Actinidia10875 Actinidia chinensis
Actinidia25934 Actinidia chinensis
Actinidia31476 Actinidia chinensis
Actinidia31477 Actinidia chinensis
Actinidia31478 Actinidia chinensis
Actinidia31479 Actinidia chinensis
Ah.07g199630 Amaranthus hybridus
Ah.12g053730 Amaranthus hybridus
AL8G11270 Arabidopsis lyrata
Aqoxy3G02561 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.FN6SHM Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.L380RS Arachis hypogaea
AT5G47010 Arabidopsis thaliana
ATR1136G154 Amborella trichopoda
Atru.chr6.1792 Acer truncatum
AUR62007211 Chenopodium quinoa
AUR62018790 Chenopodium quinoa
BcaB07g30801 Brassica carinata
BcaC03g16917 Brassica carinata
BcaC03g16918 Brassica carinata
BcaC04g21663 Brassica carinata
BolC2t10853H Brassica oleracea
BolC9t55782H Brassica oleracea
BolC9t55783H Brassica oleracea
BraA02t08082Z Brassica rapa
C02p48200 Brassica napus
C09p29220 Brassica napus
CAN.G572.54 Capsicum annuum
CAN.G845.27 Capsicum annuum
CANSAT21G0831 Cannabis sativa
CARHR174460 Cardamine hirsuta
Carub.0008s0082 Capsella rubella
Ca_24627_v3 Cicer arietinum L.
CBR_g39626 Chara braunii
CBR_g8052 Chara braunii
Cc08_g01700 Coffea canephora
CDE06G0953 Ceratophyllum demersum
CDE12G0177 Ceratophyllum demersum
Cfa012367 Carpinus fangiana
Cfa026616 Carpinus fangiana
Ciclev10031552m.g Citrus clementina
Ciclev10033615m.g Citrus clementina
CiPaw.01G196500 Carya illinoinensis
CiPaw.11G086500 Carya illinoinensis
CiPaw.12G059100 Carya illinoinensis
ClCG10G001940 Citrullus lanatus
COL.COLO4_17034 Corchorus olitorius
COL.COLO4_17123 Corchorus olitorius
Cpa.g.sc29.1 Carica papaya
Cpa.g.sc29.2 Carica papaya
Cre01.g048200 Chlamydomonas reinhardtii
Cre02.g092500 Chlamydomonas reinhardtii
Cre09.g396139 Chlamydomonas reinhardtii
CsaV3_3G002080 Cucumis sativus L.
CSS0021238 Camellia sinensis var. sinensis
CSS0035885 Camellia sinensis var. sinensis
CSS0041371 Camellia sinensis var. sinensis
CSS0042114 Camellia sinensis var. sinensis
CSS0044293 Camellia sinensis var. sinensis
DCAR_005597 Daucus carota
DCAR_008304 Daucus carota
DCAR_008305 Daucus carota
Dinv25173 Davidia involucrata
Dinv28904 Davidia involucrata
Duzib068G0921 Durio zibethinus
Duzib205G1433 Durio zibethinus
ECA233G4074 Erigeron canadensis
EL10Ac5g12207 Beta vulgaris
Eucgr.E00323 Eucalyptus grandis
FAN04G1896 Fragaria x ananassa
FAN08G2510 Fragaria x ananassa
FAN13G2517 Fragaria x ananassa
FAN18G0956 Fragaria x ananassa
FvH4_5g20920 Fragaria vesca
Glyma.01G202600 Glycine max
Glyma.11G040200 Glycine max
Gohir.A03G003000 Gossypium hirsutum
Gohir.A08G160500 Gossypium hirsutum
Gohir.A09G197800 Gossypium hirsutum
Gohir.D03G169400 Gossypium hirsutum
Gohir.D08G180800 Gossypium hirsutum
Gohir.D09G192400 Gossypium hirsutum
Gorai.003G179500 Gossypium raimondii
Gorai.004G189700 Gossypium raimondii
Gorai.006G215300 Gossypium raimondii
GSVIVG01013247001 Vitis vinifera
HanXRQChr03g0086991 Helianthus annuus
Haze_08316 Corylus avellana
Haze_26602 Corylus avellana
Hma1.2p1_0021F.1_g014370 Hydrangea macrophylla
Hma1.2p1_0414F.1_g147610 Hydrangea macrophylla
Hma1.2p1_0666F.1_g199500 Hydrangea macrophylla
HPP92_014871 Vanilla planifolia
HPP92_014919 Vanilla planifolia
HPP92_014920 Vanilla planifolia
Hund11293 Selenicereus undatus
Hund14450 Selenicereus undatus
Lalb_Chr05g0214101 Lupinus albus
Lalb_Chr09g0323981 Lupinus albus
Lalb_Chr16g0379271 Lupinus albus
Lj2C248G9 Lonicera japonica
Lj2g0002868 Lotus japonicus
Lj8C288T9 Lonicera japonica
Lsat_1_v5_gn_6_68181 Lactuca sativa
Lsat_1_v5_gn_6_89421 Lactuca sativa
Manes.17G021900 Manihot esculenta
Mapoly0029s0126 Marchantia polymorpha
MBI04_g03344_MAGBIO Magnolia biondii
MCO03G086 Micromonas commoda
MCO10G305 Micromonas commoda
MCO14G422 Micromonas commoda
MD04G1136100 Malus domestica
MD06G1042600 Malus domestica
MD16G1268400 Malus domestica
Medtr5g013820 Medicago truncatula
MELO3C013879.2 Cucumis melo
Migut.E00804 Erythranthe guttata
Migut.E00902 Erythranthe guttata
Nitab4.5_0001444g0010 Nicotiana tabacum
Nitab4.5_0004832g0040 Nicotiana tabacum
Nitab4.5_0005487g0030 Nicotiana tabacum
Nitab4.5_0008709g0020 Nicotiana tabacum
Nn1g00076 Nelumbo nucifera
Nn1g00669 Nelumbo nucifera
Nn6g33690 Nelumbo nucifera
Oeu019051.3 Olea europaea
Oeu039350.3 Olea europaea
Oeu050661.1 Olea europaea
Oeu053049.1 Olea europaea
Os07g0495900 Oryza sativa ssp. japonica
Peaxi162Scf00084g00613 Petunia axillaris
Peaxi162Scf00102g00730 Petunia axillaris
PGR042G0017 Punica granatum
PGSC0003DMG400001863 Solanum tuberosum
PGSC0003DMG400034293 Solanum tuberosum
Phvul.002G003300 Phaseolus vulgaris
Potri.001G148100 Populus trichocarpa
Potri.003G086400 Populus trichocarpa
Pp3c20_16510 Physcomitrium patens
Pp3c23_9370 Physcomitrium patens
PRCOL_00000203 Prasinoderma coloniale
PRCOL_00001514 Prasinoderma coloniale
Prupe.5G049500 Prunus persica
Psat0s4928g0040 Pisum sativum
Psat2g175000 Pisum sativum
Psat4g095800 Pisum sativum
Psat4g136640 Pisum sativum
Psat4g136680 Pisum sativum
PSO063G6653 Papaver somniferum
PSO782G3028 Papaver somniferum
QL04p033080 Quercus lobata
QL12p007494 Quercus lobata
RcHm_v2.0_Chr7g0207971 Rosa chinensis
Rhsim07G0121100 Rhododendron simsii
Rhsim11G0009100 Rhododendron simsii
Sabra01G0116400 Salix brachista
Sabra01G0117900 Salix brachista
Sabra03G0056200 Salix brachista
Sc01g0007820 Simmondsia chinensis
Sed0018558 Sechium edule
SEGI_12247 Sequoiadendron giganteum
SEGI_28600 Sequoiadendron giganteum
SGA_v2.0_scaffold20G09241 Striga asiatica
SGA_v2.0_scaffold6G03173 Striga asiatica
SHI07527 Sapria himalayana
Solyc08g007110.4 Solanum lycopersicum
Solyc08g077420.3 Solanum lycopersicum
Sopen08g003060 Solanum pennellii
Sopen08g026010 Solanum pennellii
Sp2g11810 Schrenkiella parvula
TAR105G0003 Trochodendron aralioides
TAR106G0001 Trochodendron aralioides
TAR375G0650 Trochodendron aralioides
TAR469G0002 Trochodendron aralioides
TAR623G1066 Trochodendron aralioides
TAR629G0968 Trochodendron aralioides
TAR629G1588 Trochodendron aralioides
TAR633G0798 Trochodendron aralioides
THA.LOC104806689 Tarenaya hassleriana
Thecc.03G235600 Theobroma cacao
Thhalv10000743m.g Eutrema salsugineum
TPR.G22716 Trifolium pratense
TWI15G0852 Tripterygium wilfordii
TWI60G1508 Tripterygium wilfordii
TWI81G0847 Tripterygium wilfordii
unitig_22.g5496 Utricularia gibba
vmacro00364 Vaccinium macrocarpon
vmacro14146 Vaccinium macrocarpon
VMungo1215G0424 Vigna mungo
Zm00001eb105540 Zea mays
Zm00001eb252110 Zea mays
Zm00001eb322020 Zea mays

User provided reference genes

Program Settings