Gene: SEGI_28600

General Information

Structural Information

  • Species Sequoiadendron giganteum
  • Gene Identifier SEGI_28600
  • Transcript Identifier SEGI_28600.1
  • Gene Type Coding gene
  • Location chr4 : 707307793-707327313 : positive

Gene Family Information

  • ID HOM05D000188
  • #Genes/#Species 2040/99
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid SEGI_28600.1

Descriptions

  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0000184
IEA
InterPronuclear-transcribed mRNA catabolic process, nonsense-mediated decay

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003723
IEA
InterProRNA binding
GO:0003724
IEA
InterProRNA helicase activity
GO:0005524
IEA
InterProATP binding
GO:0008270
IEA
InterProzinc ion binding
GO:0004386
IEA
InterProhelicase activity

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005737
IEA
InterProcytoplasm

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR027417 P-loop containing nucleoside triphosphate hydrolase
IPR018999 RNA helicase UPF1, Cys/His rich zinc-binding domain
IPR041677 DNA2/NAM7 helicase, helicase domain
IPR040812 RNA helicase UPF1, 1B domain
IPR045055 DNA2/NAM7-like helicase
Mapman id Description
17.3.2.3 Protein biosynthesis.mRNA quality control.NMD Nonsense-Mediated Decay.effector protein (UPF1)