Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A02p24180 Brassica napus
A03p32110 Brassica napus
A04p34060 Brassica napus
A07p25390 Brassica napus
A09p00380 Brassica napus
A09p53310 Brassica napus
Aa31LG10G15320 Aethionema arabicum
Aa31LG1G27260 Aethionema arabicum
Aa31LG5G360 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_117.4110 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_344.4486 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_344.4553 Anthoceros agrestis
Actinidia10007 Actinidia chinensis
Actinidia12712 Actinidia chinensis
Actinidia33429 Actinidia chinensis
Ah.02g116510 Amaranthus hybridus
Ah.05g176530 Amaranthus hybridus
Ah.12g057260 Amaranthus hybridus
AL4G45020 Arabidopsis lyrata
AL5G43510 Arabidopsis lyrata
AL6G52800 Arabidopsis lyrata
Aqoxy7G00366 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.L4FN8Y Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.P00SCV Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.V2AJHY Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.ZGDJ5C Arachis hypogaea
AT2G45810 Arabidopsis thaliana
AT3G61240 Arabidopsis thaliana
AT4G00660 Arabidopsis thaliana
ATR0618G173 Amborella trichopoda
ATR0680G374 Amborella trichopoda
Atru.chr5.478 Acer truncatum
AUR62004325 Chenopodium quinoa
AUR62010608 Chenopodium quinoa
AUR62017250 Chenopodium quinoa
AUR62033320 Chenopodium quinoa
AUR62033339 Chenopodium quinoa
BcaB01g02264 Brassica carinata
BcaB02g07383 Brassica carinata
BcaC01g06867 Brassica carinata
BcaC02g07056 Brassica carinata
BcaC02g07060 Brassica carinata
BcaC03g16045 Brassica carinata
BcaC04g24156 Brassica carinata
BcaC08g45114 Brassica carinata
BolC2t09821H Brassica oleracea
BolC3t16184H Brassica oleracea
BolC4t28684H Brassica oleracea
BolC6t37901H Brassica oleracea
BolC8t51193H Brassica oleracea
BolC9t52986H Brassica oleracea
BraA02t07409Z Brassica rapa
BraA03t12381Z Brassica rapa
BraA04t18867Z Brassica rapa
BraA07t30183Z Brassica rapa
BraA09t35723Z Brassica rapa
BraA09t40756Z Brassica rapa
C02p38050 Brassica napus
C03p39120 Brassica napus
C04p71860 Brassica napus
C06p27320 Brassica napus
C08p36110 Brassica napus
C09p00520 Brassica napus
CAN.G265.9 Capsicum annuum
CAN.G78.48 Capsicum annuum
CANSAT56G1072 Cannabis sativa
CARHR141080 Cardamine hirsuta
CARHR171540 Cardamine hirsuta
CARHR248790 Cardamine hirsuta
Carub.0004s2851 Capsella rubella
Carub.0005s2789 Capsella rubella
Carub.0006s3655 Capsella rubella
Ca_07897_v3 Cicer arietinum L.
Ca_23652_v3 Cicer arietinum L.
CBR_g23054 Chara braunii
Cc02_g37730 Coffea canephora
Cc08_g14400 Coffea canephora
CDE05G2229 Ceratophyllum demersum
CDE08G0692 Ceratophyllum demersum
CDE09G1244 Ceratophyllum demersum
CDE11G0444 Ceratophyllum demersum
Ciclev10019858m.g Citrus clementina
CiPaw.01G058100 Carya illinoinensis
CiPaw.02G028900 Carya illinoinensis
ClCG05G001650 Citrullus lanatus
COL.COLO4_12680 Corchorus olitorius
Cpa.g.sc18.230 Carica papaya
Cpa.g.sc18.231 Carica papaya
Cre04.g223850 Chlamydomonas reinhardtii
CsaV3_3G009030 Cucumis sativus L.
CSS0005685 Camellia sinensis var. sinensis
CSS0009148 Camellia sinensis var. sinensis
CSS0015768 Camellia sinensis var. sinensis
CSS0030623 Camellia sinensis var. sinensis
CSS0042657 Camellia sinensis var. sinensis
DCAR_004647 Daucus carota
DCAR_006916 Daucus carota
DCAR_015938 Daucus carota
DCAR_025139 Daucus carota
Dinv32458 Davidia involucrata
Dinv43788 Davidia involucrata
Duzib133G1038 Durio zibethinus
Duzib138G1814 Durio zibethinus
Duzib268G0821 Durio zibethinus
ECA233G3405 Erigeron canadensis
ECA236G0144 Erigeron canadensis
EL10Ac1g00538 Beta vulgaris
EL10Ac5g12772 Beta vulgaris
Eucgr.D02270 Eucalyptus grandis
FAN01G1376 Fragaria x ananassa
FAN03G0061 Fragaria x ananassa
FAN06G0086 Fragaria x ananassa
FAN06G4404 Fragaria x ananassa
FAN10G2091 Fragaria x ananassa
FvH4_7g13810 Fragaria vesca
Glyma.03G013000 Glycine max
Glyma.03G013200 Glycine max
Glyma.07G072700 Glycine max
Glyma.07G072900 Glycine max
Glyma.09G261400 Glycine max
Glyma.17G184800 Glycine max
Gohir.A07G142800 Gossypium hirsutum
Gohir.A08G032700 Gossypium hirsutum
Gohir.A08G130200 Gossypium hirsutum
Gohir.A11G087100 Gossypium hirsutum
Gohir.D07G148600 Gossypium hirsutum
Gohir.D08G043600 Gossypium hirsutum
Gohir.D08G151600 Gossypium hirsutum
Gohir.D11G091500 Gossypium hirsutum
Gorai.001G169800 Gossypium raimondii
Gorai.004G042200 Gossypium raimondii
Gorai.004G157400 Gossypium raimondii
Gorai.007G097600 Gossypium raimondii
Gorai.013G058500 Gossypium raimondii
GSVIVG01019787001 Vitis vinifera
GSVIVG01026866001 Vitis vinifera
HanXRQChr02g0048871 Helianthus annuus
HanXRQChr04g0121511 Helianthus annuus
HanXRQChr06g0165761 Helianthus annuus
Haze_15469 Corylus avellana
Haze_26677 Corylus avellana
HPP92_022616 Vanilla planifolia
Hund11489 Selenicereus undatus
Hund27298 Selenicereus undatus
Lalb_Chr03g0038191 Lupinus albus
Lalb_Chr04g0256831 Lupinus albus
Lalb_Chr10g0097151 Lupinus albus
Lalb_Chr17g0339821 Lupinus albus
Lalb_Chr19g0126981 Lupinus albus
Lj1g0014670 Lotus japonicus
Lj3g0024533 Lotus japonicus
Lj7A516G82 Lonicera japonica
Lj8A233T59 Lonicera japonica
Lj9C581T5 Lonicera japonica
Lsat_1_v5_gn_3_136560 Lactuca sativa
Lsat_1_v5_gn_6_5781 Lactuca sativa
Lsat_1_v5_gn_7_4980 Lactuca sativa
Manes.01G259600 Manihot esculenta
Manes.05G037200 Manihot esculenta
Mapoly0009s0142 Marchantia polymorpha
MBI18_g09032_MAGBIO Magnolia biondii
MCO14G539 Micromonas commoda
MD01G1054200 Malus domestica
MD07G1141100 Malus domestica
Medtr0915s0010 Medicago truncatula
Medtr7g076800 Medicago truncatula
Medtr7g076820 Medicago truncatula
Medtr7g076830 Medicago truncatula
MELO3C006121.2 Cucumis melo
Migut.A00790 Erythranthe guttata
Migut.B01716 Erythranthe guttata
Migut.N01432 Erythranthe guttata
MSTRG.20815 Avicennia marina
MSTRG.4865 Avicennia marina
Nitab4.5_0000386g0190 Nicotiana tabacum
Nitab4.5_0001853g0030 Nicotiana tabacum
Nitab4.5_0002160g0090 Nicotiana tabacum
Nitab4.5_0018652g0010 Nicotiana tabacum
Nn1g01449 Nelumbo nucifera
Nn6g33516 Nelumbo nucifera
Oeu004519.3 Olea europaea
Oeu033973.1 Olea europaea
Oeu053288.1 Olea europaea
Oeu053289.1 Olea europaea
Oeu056353.1 Olea europaea
Os02g0641800 Oryza sativa ssp. japonica
Os04g0533000 Oryza sativa ssp. japonica
Os10g0503700 Oryza sativa ssp. japonica
Peaxi162Scf00008g02025 Petunia axillaris
Peaxi162Scf00056g00315 Petunia axillaris
PGR031G2591 Punica granatum
PGR042G3386 Punica granatum
Phvul.008G066400 Phaseolus vulgaris
Phvul.010G097700 Phaseolus vulgaris
Potri.002G157500 Populus trichocarpa
Potri.014G081100 Populus trichocarpa
Pp3c11_17170 Physcomitrium patens
Pp3s121_40 Physcomitrium patens
PRCOL_00000470 Prasinoderma coloniale
Prupe.2G163800 Prunus persica
Psat3g110440 Pisum sativum
Psat4g202840 Pisum sativum
Psat5g012720 Pisum sativum
QL08p049469 Quercus lobata
RcHm_v2.0_Chr1g0353991 Rosa chinensis
Rhsim01G0152000 Rhododendron simsii
Rhsim07G0017600 Rhododendron simsii
Sabra02G0125200 Salix brachista
Sabra14G0059000 Salix brachista
SalBow3G3116 Salvia bowleyana
Sc22g0000190 Simmondsia chinensis
Sc23g0003060 Simmondsia chinensis
Sed0015135 Sechium edule
Sed0018792 Sechium edule
SEGI_09536 Sequoiadendron giganteum
SEGI_24188 Sequoiadendron giganteum
SGA_v2.0_scaffold11G05658 Striga asiatica
SGA_v2.0_scaffold144G35960 Striga asiatica
SGA_v2.0_scaffold277G46669 Striga asiatica
SGA_v2.0_scaffold385G50465 Striga asiatica
SGA_v2.0_scaffold43G16440 Striga asiatica
SMO339G0023 Selaginella moellendorffii
Solyc01g094350.4 Solanum lycopersicum
Solyc05g048850.4 Solanum lycopersicum
Solyc10g017530.3 Solanum lycopersicum
Sopen01g038140 Solanum pennellii
Sopen05g028180 Solanum pennellii
Sopen10g006340 Solanum pennellii
Sp4g27880 Schrenkiella parvula
Sp5g02130 Schrenkiella parvula
Sp6g00650 Schrenkiella parvula
TAR374G0084 Trochodendron aralioides
TAR375G0497 Trochodendron aralioides
TAR636G2662 Trochodendron aralioides
THA.LOC104814100 Tarenaya hassleriana
THA.LOC104817022 Tarenaya hassleriana
THA.LOC104817284 Tarenaya hassleriana
Thecc.01G362900 Theobroma cacao
Thhalv10001405m.g Eutrema salsugineum
Thhalv10005922m.g Eutrema salsugineum
Thhalv10028588m.g Eutrema salsugineum
TPR.G37808 Trifolium pratense
TPR.G4445 Trifolium pratense
TWI14G0555 Tripterygium wilfordii
TWI23G0332 Tripterygium wilfordii
TWI59G0472 Tripterygium wilfordii
TWI59G1196 Tripterygium wilfordii
unitig_0.g1275 Utricularia gibba
unitig_61.g26396 Utricularia gibba
vmacro13303 Vaccinium macrocarpon
vmacro20953 Vaccinium macrocarpon
VMungo0331G1099 Vigna mungo
VMungo1383G0727 Vigna mungo
VMungo1383G0760 Vigna mungo
Zm00001eb044130 Zea mays
Zm00001eb185930 Zea mays
Zm00001eb220770 Zea mays
Zm00001eb248580 Zea mays

User provided reference genes

Program Settings