Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A01p25180 Brassica napus
A03p16380 Brassica napus
A03p16460 Brassica napus
A06p18880 Brassica napus
Aa31LG2G1370 Aethionema arabicum
Aa31LG3G7410 Aethionema arabicum
Aa31LG3G7560 Aethionema arabicum
Aa31LG4G17380 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_228.792 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_344.2914 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_368.3044 Anthoceros agrestis
Actinidia08920 Actinidia chinensis
Actinidia09842 Actinidia chinensis
Actinidia25499 Actinidia chinensis
Actinidia33604 Actinidia chinensis
Ah.02g114650 Amaranthus hybridus
Ah.09g224460 Amaranthus hybridus
Ah.11g046770 Amaranthus hybridus
AL1G34580 Arabidopsis lyrata
AL5G24020 Arabidopsis lyrata
AL5G28380 Arabidopsis lyrata
AL8G25110 Arabidopsis lyrata
AL8G25320 Arabidopsis lyrata
Aqoxy3G01886 Aquilegia oxysepala
Aqoxy5G02915 Aquilegia oxysepala
Aqoxy5G03174 Aquilegia oxysepala
Aqoxy5G03177 Aquilegia oxysepala
Aqoxy5G03194 Aquilegia oxysepala
Aqoxy7G01780 Aquilegia oxysepala
Aqoxy7G02620 Aquilegia oxysepala
Aqoxy7G02623 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.40Y6RI Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.7S9HSP Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.C9ICWX Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.CD9ZR0 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.EZF9NP Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.F17DQG Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.HKUW7L Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.M3YFI4 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.PT1JHX Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.ZC3RNY Arachis hypogaea
AT1G21470 Arabidopsis thaliana
AT3G45450 Arabidopsis thaliana
AT3G48870 Arabidopsis thaliana
AT5G50920 Arabidopsis thaliana
AT5G51070 Arabidopsis thaliana
ATR0582G075 Amborella trichopoda
ATR0582G302 Amborella trichopoda
Atru.chr6.1902 Acer truncatum
Atru.chr6.1961 Acer truncatum
AUR62009519 Chenopodium quinoa
AUR62009520 Chenopodium quinoa
AUR62011204 Chenopodium quinoa
AUR62013201 Chenopodium quinoa
AUR62013283 Chenopodium quinoa
AUR62034768 Chenopodium quinoa
BcaB01g00774 Brassica carinata
BcaB05g22981 Brassica carinata
BcaC01g06068 Brassica carinata
BcaC01g06109 Brassica carinata
BcaC04g20736 Brassica carinata
BcaC07g39362 Brassica carinata
BcaC09g49911 Brassica carinata
BcaNung07187 Brassica carinata
BolC1t03075H Brassica oleracea
BolC3t14312H Brassica oleracea
BolC3t14321H Brassica oleracea
BolC8t50010H Brassica oleracea
BolC9t56875H Brassica oleracea
BraA01t02426Z Brassica rapa
BraA03t10928Z Brassica rapa
BraA03t10935Z Brassica rapa
BraA06t24971Z Brassica rapa
C01p31380 Brassica napus
C03p19260 Brassica napus
C03p19350 Brassica napus
C07p17170 Brassica napus
C08p23840 Brassica napus
C09p39740 Brassica napus
CAN.G1008.35 Capsicum annuum
CAN.G521.1 Capsicum annuum
CAN.G521.3 Capsicum annuum
CAN.G843.23 Capsicum annuum
CANSAT56G1478 Cannabis sativa
CANSAT56G4163 Cannabis sativa
CANSAT64G1667 Cannabis sativa
CANSAT64G2937 Cannabis sativa
CARHR157680 Cardamine hirsuta
CARHR257020 Cardamine hirsuta
CARHR257340 Cardamine hirsuta
Carub.0005s1504 Capsella rubella
Carub.0008s1093 Capsella rubella
Carub.0008s1107 Capsella rubella
Ca_10884_v3 Cicer arietinum L.
Ca_12450_v3 Cicer arietinum L.
Ca_17046_v3 Cicer arietinum L.
Ca_17585_v3 Cicer arietinum L.
CBR_g57961 Chara braunii
CBR_g8305 Chara braunii
Cc00_g15780 Coffea canephora
Cc04_g05560 Coffea canephora
Cc04_g05910 Coffea canephora
CDE02G0465 Ceratophyllum demersum
CDE02G2810 Ceratophyllum demersum
CDE02G3084 Ceratophyllum demersum
CDE06G0243 Ceratophyllum demersum
CDE06G1257 Ceratophyllum demersum
CDE09G0897 Ceratophyllum demersum
Cfa018719 Carpinus fangiana
Cfa020946 Carpinus fangiana
Ciclev10017868m.g Citrus clementina
Ciclev10017899m.g Citrus clementina
Ciclev10018359m.g Citrus clementina
Ciclev10030757m.g Citrus clementina
Ciclev10030863m.g Citrus clementina
Ciclev10033976m.g Citrus clementina
CiPaw.11G001300 Carya illinoinensis
CiPaw.12G001600 Carya illinoinensis
CiPaw.15G186500 Carya illinoinensis
ClCG03G001710 Citrullus lanatus
ClCG06G018330 Citrullus lanatus
ClCG09G021780 Citrullus lanatus
COL.COLO4_13361 Corchorus olitorius
COL.COLO4_13362 Corchorus olitorius
COL.COLO4_17194 Corchorus olitorius
COL.COLO4_37236 Corchorus olitorius
COL.COLO4_37290 Corchorus olitorius
Cpa.g.sc1024.2 Carica papaya
Cpa.g.sc13.205 Carica papaya
Cre10.g465550 Chlamydomonas reinhardtii
Cre43.g760497 Chlamydomonas reinhardtii
CsaV3_1G000100 Cucumis sativus L.
CsaV3_1G033930 Cucumis sativus L.
CsaV3_7G021260 Cucumis sativus L.
CSS0007030 Camellia sinensis var. sinensis
CSS0009915 Camellia sinensis var. sinensis
CSS0017233 Camellia sinensis var. sinensis
CSS0021948 Camellia sinensis var. sinensis
CSS0029450 Camellia sinensis var. sinensis
CSS0043420 Camellia sinensis var. sinensis
CSS0044818 Camellia sinensis var. sinensis
DCAR_016324 Daucus carota
DCAR_016352 Daucus carota
DCAR_021790 Daucus carota
DCAR_022314 Daucus carota
DCAR_025657 Daucus carota
Dinv13735 Davidia involucrata
Dinv23211 Davidia involucrata
Dinv23248 Davidia involucrata
Dinv33288 Davidia involucrata
Duzib068G0301 Durio zibethinus
Duzib084G0746 Durio zibethinus
Duzib084G1075 Durio zibethinus
Duzib205G0028 Durio zibethinus
Duzib205G1005 Durio zibethinus
ECA232G2662 Erigeron canadensis
ECA232G4287 Erigeron canadensis
ECA247G2359 Erigeron canadensis
ECA247G2390 Erigeron canadensis
EL10Ac5g11304 Beta vulgaris
EL10Ac8g18778 Beta vulgaris
Eucgr.H00243 Eucalyptus grandis
Eucgr.K02198 Eucalyptus grandis
FAN04G0962 Fragaria x ananassa
FAN04G2315 Fragaria x ananassa
FAN04G3089 Fragaria x ananassa
FAN08G0605 Fragaria x ananassa
FAN08G2258 Fragaria x ananassa
FAN13G0651 Fragaria x ananassa
FAN13G2516 Fragaria x ananassa
FAN18G1463 Fragaria x ananassa
FAN18G1613 Fragaria x ananassa
FAN18G4242 Fragaria x ananassa
FvH4_5g09290 Fragaria vesca
FvH4_5g10020 Fragaria vesca
FvH4_5g30120 Fragaria vesca
FvH4_5g30130 Fragaria vesca
FvH4_6g04512 Fragaria vesca
Glyma.04G200400 Glycine max
Glyma.04G203300 Glycine max
Glyma.05G201100 Glycine max
Glyma.06G162200 Glycine max
Glyma.06G165200 Glycine max
Glyma.08G008400 Glycine max
Gohir.A03G056700 Gossypium hirsutum
Gohir.A07G045466 Gossypium hirsutum
Gohir.A07G045532 Gossypium hirsutum
Gohir.A07G047400 Gossypium hirsutum
Gohir.A09G248300 Gossypium hirsutum
Gohir.A12G193350 Gossypium hirsutum
Gohir.D03G109800 Gossypium hirsutum
Gohir.D07G049900 Gossypium hirsutum
Gohir.D07G051600 Gossypium hirsutum
Gohir.D09G249300 Gossypium hirsutum
Gorai.001G053000 Gossypium raimondii
Gorai.001G054700 Gossypium raimondii
Gorai.003G116200 Gossypium raimondii
Gorai.006G273600 Gossypium raimondii
GSVIVG01008636001 Vitis vinifera
GSVIVG01014062001 Vitis vinifera
GSVIVG01033000001 Vitis vinifera
HanXRQChr01g0025711 Helianthus annuus
HanXRQChr02g0035741 Helianthus annuus
HanXRQChr05g0154561 Helianthus annuus
HanXRQChr07g0186811 Helianthus annuus
HanXRQChr08g0235061 Helianthus annuus
HanXRQChr09g0273921 Helianthus annuus
HanXRQChr09g0274331 Helianthus annuus
HanXRQChr13g0393991 Helianthus annuus
HanXRQChr16g0498881 Helianthus annuus
HanXRQChr16g0499171 Helianthus annuus
Haze_07112 Corylus avellana
Haze_19382 Corylus avellana
Haze_27277 Corylus avellana
Hma1.2p1_1070F.1_g254130 Hydrangea macrophylla
Hma1.2p1_1171F.1_g263510 Hydrangea macrophylla
Hma1.2p1_1208F.1_g267080 Hydrangea macrophylla
HPP92_001281 Vanilla planifolia
HPP92_021689 Vanilla planifolia
HPP92_021714 Vanilla planifolia
Hund02498 Selenicereus undatus
Hund02499 Selenicereus undatus
Hund06182 Selenicereus undatus
Hund06348 Selenicereus undatus
Hund10055 Selenicereus undatus
Lalb_Chr07g0183761 Lupinus albus
Lalb_Chr11g0069261 Lupinus albus
Lalb_Chr12g0202421 Lupinus albus
Lalb_Chr12g0202441 Lupinus albus
Lalb_Chr13g0297011 Lupinus albus
Lalb_Chr21g0316921 Lupinus albus
Lalb_Chr23g0272821 Lupinus albus
Lalb_Chr23g0272901 Lupinus albus
Lj1g0007052 Lotus japonicus
Lj1g0019828 Lotus japonicus
Lj1g0020765 Lotus japonicus
Lj4g0023906 Lotus japonicus
Lj5A84T53 Lonicera japonica
Lj5C88T5 Lonicera japonica
Lj9C485G16 Lonicera japonica
Lju41A60T33 Lonicera japonica
Lsat_1_v5_gn_1_27961 Lactuca sativa
Lsat_1_v5_gn_4_84680 Lactuca sativa
Lsat_1_v5_gn_4_85180 Lactuca sativa
Lsat_1_v5_gn_5_15361 Lactuca sativa
Lsat_1_v5_gn_5_15861 Lactuca sativa
Manes.06G125800 Manihot esculenta
Manes.11G077400 Manihot esculenta
Manes.14G042400 Manihot esculenta
Manes.14G045700 Manihot esculenta
Mapoly0113s0004 Marchantia polymorpha
Mapoly0229s0009 Marchantia polymorpha
MBI07_g07341_MAGBIO Magnolia biondii
MBI07_g11067_MAGBIO Magnolia biondii
MBI11_g11870_MAGBIO Magnolia biondii
MCO11G372 Micromonas commoda
MCO12G130 Micromonas commoda
MCO13G448 Micromonas commoda
MD06G1128400 Malus domestica
MD06G1132300 Malus domestica
MD14G1148700 Malus domestica
Medtr1g076440 Medicago truncatula
Medtr3g098310 Medicago truncatula
Medtr3g102830 Medicago truncatula
Medtr3g461000 Medicago truncatula
Medtr3g498725 Medicago truncatula
Medtr8g100040 Medicago truncatula
MELO3C013228.2 Cucumis melo
MELO3C020666.2 Cucumis melo
MELO3C026162.2 Cucumis melo
Migut.D01192 Erythranthe guttata
Migut.I00611 Erythranthe guttata
Migut.I00650 Erythranthe guttata
MSTRG.11208 Avicennia marina
MSTRG.22854 Avicennia marina
MSTRG.4638 Avicennia marina
MSTRG.9368 Avicennia marina
Nitab4.5_0000663g0180 Nicotiana tabacum
Nitab4.5_0000976g0270 Nicotiana tabacum
Nitab4.5_0002450g0030 Nicotiana tabacum
Nitab4.5_0003119g0020 Nicotiana tabacum
Nitab4.5_0007669g0010 Nicotiana tabacum
Nitab4.5_0009686g0040 Nicotiana tabacum
Nitab4.5_0010824g0050 Nicotiana tabacum
Nn3g16302 Nelumbo nucifera
Nn4g22045 Nelumbo nucifera
Nn4g22167 Nelumbo nucifera
Oeu013654.1 Olea europaea
Oeu013655.1 Olea europaea
Oeu015116.1 Olea europaea
Oeu017192.1 Olea europaea
Oeu036710.1 Olea europaea
Oeu061251.2 Olea europaea
Oeu063942.1 Olea europaea
Oeu063960.1 Olea europaea
Oeu063963.1 Olea europaea
Oeu063968.1 Olea europaea
Oeu063969.1 Olea europaea
Os02g0526400 Oryza sativa ssp. japonica
Os11g0267400 Oryza sativa ssp. japonica
Os11g0269000 Oryza sativa ssp. japonica
Os12g0230100 Oryza sativa ssp. japonica
Peaxi162Scf00314g00528 Petunia axillaris
Peaxi162Scf00314g00835 Petunia axillaris
Peaxi162Scf01168g00111 Petunia axillaris
PGR004G1503 Punica granatum
PGR044G1784 Punica granatum
PGSC0003DMG400014225 Solanum tuberosum
PGSC0003DMG400014248 Solanum tuberosum
PGSC0003DMG400021039 Solanum tuberosum
PGSC0003DMG401014476 Solanum tuberosum
PGSC0003DMG402014476 Solanum tuberosum
Phvul.002G282500 Phaseolus vulgaris
Phvul.009G159300 Phaseolus vulgaris
Phvul.009G162100 Phaseolus vulgaris
Potri.005G197400 Populus trichocarpa
Potri.012G105900 Populus trichocarpa
Potri.012G112000 Populus trichocarpa
Potri.015G105100 Populus trichocarpa
Potri.015G110000 Populus trichocarpa
Pp3c16_17640 Physcomitrium patens
Pp3c18_15840 Physcomitrium patens
Pp3c21_5430 Physcomitrium patens
Pp3c25_7180 Physcomitrium patens
Pp3c3_18360 Physcomitrium patens
Pp3c5_23010 Physcomitrium patens
Pp3c6_7360 Physcomitrium patens
PRCOL_00002464 Prasinoderma coloniale
PRCOL_00002580 Prasinoderma coloniale
PRCOL_00004540 Prasinoderma coloniale
Prupe.5G138200 Prunus persica
Prupe.5G143300 Prunus persica
Psat5g054560 Pisum sativum
Psat5g055960 Pisum sativum
Psat5g166600 Pisum sativum
Psat7g039080 Pisum sativum
PSO017G1811 Papaver somniferum
PSO017G2230 Papaver somniferum
PSO017G2414 Papaver somniferum
PSO017G3710 Papaver somniferum
PSO017G4374 Papaver somniferum
PSO063G3872 Papaver somniferum
PSO478G3114 Papaver somniferum
PSO478G3632 Papaver somniferum
PSO478G3941 Papaver somniferum
PSO478G5088 Papaver somniferum
QL02p069859 Quercus lobata
QL02p069872 Quercus lobata
QL10p000886 Quercus lobata
QL10p035343 Quercus lobata
QL10p036959 Quercus lobata
RcHm_v2.0_Chr4g0406181 Rosa chinensis
RcHm_v2.0_Chr7g0188241 Rosa chinensis
RcHm_v2.0_Chr7g0188931 Rosa chinensis
RcHm_v2.0_Chr7g0224361 Rosa chinensis
RcHm_v2.0_Chr7g0226601 Rosa chinensis
RcHm_v2.0_Chr7g0228631 Rosa chinensis
RcHm_v2.0_Chr7g0228651 Rosa chinensis
Rhsim08G0196000 Rhododendron simsii
Rhsim08G0200500 Rhododendron simsii
Rhsim12G0180500 Rhododendron simsii
Rhsim12G0182500 Rhododendron simsii
Sabra12G0078200 Salix brachista
Sabra12G0081600 Salix brachista
Sabra15G0125300 Salix brachista
Sabra15G0132100 Salix brachista
SalBow1G7968 Salvia bowleyana
SalBow4G0789 Salvia bowleyana
SalBow4G2541 Salvia bowleyana
SalBow5G0623 Salvia bowleyana
SalBow5G0893 Salvia bowleyana
SalBow5G1199 Salvia bowleyana
SalBow7G0009 Salvia bowleyana
SalBow7G3525 Salvia bowleyana
Sc04g0000250 Simmondsia chinensis
Sc22g0003500 Simmondsia chinensis
Sed0006912 Sechium edule
Sed0011803 Sechium edule
Sed0016051 Sechium edule
SEGI_05274 Sequoiadendron giganteum
SEGI_17040 Sequoiadendron giganteum
SEGI_27886 Sequoiadendron giganteum
SEGI_34533 Sequoiadendron giganteum
SEGI_38604 Sequoiadendron giganteum
SEGI_38718 Sequoiadendron giganteum
SGA_v2.0_scaffold142G35654 Striga asiatica
SGA_v2.0_scaffold173G39198 Striga asiatica
SGA_v2.0_scaffold40G15621 Striga asiatica
SGA_v2.0_scaffold5G02817 Striga asiatica
SHI14167 Sapria himalayana
SHI14168 Sapria himalayana
SMO111G0020 Selaginella moellendorffii
SMO293G0013 Selaginella moellendorffii
SMO353G0292 Selaginella moellendorffii
Solyc03g117950.3 Solanum lycopersicum
Solyc03g118340.3 Solanum lycopersicum
Solyc03g118360.2 Solanum lycopersicum
Solyc12g042060.3 Solanum lycopersicum
Sopen03g036850 Solanum pennellii
Sopen03g037240 Solanum pennellii
Sopen03g037260 Solanum pennellii
Sopen12g021150 Solanum pennellii
Sp5g13180 Schrenkiella parvula
Sp6g13090 Schrenkiella parvula
Sp6g13260 Schrenkiella parvula
TAR371G0742 Trochodendron aralioides
TAR374G0640 Trochodendron aralioides
TAR622G0976 Trochodendron aralioides
TAR629G2448 Trochodendron aralioides
TAR629G3077 Trochodendron aralioides
THA.LOC104798922 Tarenaya hassleriana
THA.LOC104811549 Tarenaya hassleriana
THA.LOC104811561 Tarenaya hassleriana
THA.LOC104821539 Tarenaya hassleriana
THA.LOC104825035 Tarenaya hassleriana
Thecc.03G138700 Theobroma cacao
Thecc.03G143800 Theobroma cacao
Thecc.04G046500 Theobroma cacao
Thhalv10010105m.g Eutrema salsugineum
Thhalv10010143m.g Eutrema salsugineum
Thhalv10012591m.g Eutrema salsugineum
Thhalv10012603m.g Eutrema salsugineum
TPR.G12887 Trifolium pratense
TPR.G17933 Trifolium pratense
TPR.G17943 Trifolium pratense
TPR.G21580 Trifolium pratense
TPR.G7795 Trifolium pratense
TWI14G1372 Tripterygium wilfordii
TWI23G0413 Tripterygium wilfordii
TWI39G0664 Tripterygium wilfordii
unitig_52.g17035 Utricularia gibba
unitig_52.g17037 Utricularia gibba
unitig_62.g23818 Utricularia gibba
unitig_8.g3048 Utricularia gibba
vmacro16750 Vaccinium macrocarpon
vmacro16751 Vaccinium macrocarpon
vmacro16752 Vaccinium macrocarpon
vmacro19092 Vaccinium macrocarpon
vmacro19167 Vaccinium macrocarpon
vmacro19168 Vaccinium macrocarpon
VMungo0251G1305 Vigna mungo
VMungo0331G0455 Vigna mungo
VMungo1309G2889 Vigna mungo
Zm00001eb084420 Zea mays
Zm00001eb084890 Zea mays
Zm00001eb242420 Zea mays
Zm00001eb411490 Zea mays
Zm00001eb421360 Zea mays

User provided reference genes

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