Gene: CANSAT56G1478

General Information

Structural Information

  • Species Cannabis sativa
  • Gene Identifier CANSAT56G1478
  • Transcript Identifier CANSAT56G1478.01
  • Gene Type Coding gene
  • Location NC_044371.1 : 74330117-74334498 : negative

Gene Family Information

  • ID HOM05D000422
  • #Genes/#Species 1214/100
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid rna-XM_030633070.1
  • pid XP_030488930.1
  • id gene-LOC115705672

Descriptions

  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0009658
ISO
PLAZA Integrative Orthologychloroplast organization AT5G50920
GO:0045037
ISO
PLAZA Integrative Orthologyprotein import into chloroplast stroma AT5G50920
GO:0045036
ISO
PLAZA Integrative Orthologyprotein targeting to chloroplast AT5G50920
GO:0010380
ISO
PLAZA Integrative Orthologyregulation of chlorophyll biosynthetic process AT5G50920

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003729
ISO
PLAZA Integrative OrthologymRNA binding AT5G50920
GO:0005515
ISO
PLAZA Integrative Orthologyprotein binding AT3G48870
GO:0005524
IEA
InterProATP binding
GO:0004176
ISO
PLAZA Integrative OrthologyATP-dependent peptidase activity AT5G50920
GO:0016887
IEA
InterProATP hydrolysis activity

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0009536
ISO
PLAZA Integrative Orthologyplastid AT3G48870
GO:0031897
ISO
PLAZA Integrative OrthologyTic complex AT5G50920
GO:0032991
ISO
PLAZA Integrative Orthologyprotein-containing complex AT3G48870
GO:0005618
ISO
PLAZA Integrative Orthologycell wall AT5G50920
GO:0005739
ISO
PLAZA Integrative Orthologymitochondrion AT3G48870
GO:0009507
ISO
PLAZA Integrative Orthologychloroplast AT3G48870
GO:0009706
ISO
PLAZA Integrative Orthologychloroplast inner membrane AT5G50920
GO:0009535
ISO
PLAZA Integrative Orthologychloroplast thylakoid membrane AT5G50920
GO:0009532
ISO
PLAZA Integrative Orthologyplastid stroma AT3G48870
GO:0009941
ISO
PLAZA Integrative Orthologychloroplast envelope AT3G48870
GO:0009570
ISO
PLAZA Integrative Orthologychloroplast stroma AT3G48870

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR041546 ClpA/ClpB, AAA lid domain
IPR036628 Clp, N-terminal domain superfamily
IPR001270 ClpA/B family
IPR019489 Clp ATPase, C-terminal
IPR027417 P-loop containing nucleoside triphosphate hydrolase
IPR004176 Clp, repeat (R) domain
IPR003959 ATPase, AAA-type, core
IPR003593 AAA+ ATPase domain
Mapman id Description
19.4.2.9.4 Protein homeostasis.proteolysis.serine-type peptidase activities.chloroplast Clp-type protease complex.chaperone component ClpC