Gene: AT3G48870

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier AT3G48870
  • Transcript Identifier AT3G48870.1
  • Gene Type Coding gene
  • Location Chr3 : 18122363-18126008 : negative

Gene Family Information

  • ID HOM05D000422
  • #Genes/#Species 1214/100
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid AT3G48870.1
  • symbol HSP93-III
  • uniprot Q9SXJ7

Descriptions

  • Description Clp ATPase
  • Computational description HSP93-III; FUNCTIONS IN: in 6 functions; INVOLVED IN: protein import into chloroplast stroma, chloroplast organization; LOCATED IN: in 7 components; EXPRESSED IN: guard cell, leaf; EXPRESSED DURING: seed development stages; CONTAINS InterPro DOMAIN/s: Clp ATPase, C-terminal (InterPro:IPR019489), ATPase, AAA-type, core (InterPro:IPR003959), ATPase, AAA-2 (InterPro:IPR013093), ATPase, AAA type, core (InterPro:IPR003593), Chaperonin clpA/B (InterPro:IPR001270), Chaperonin ClpA/B, conserved site (InterPro:IPR018368), UvrB/UvrC protein (InterPro:IPR001943), Clp, N-terminal (InterPro:IPR004176); BEST Arabidopsis thaliana protein match is: CLPC homologue 1 (TAIR:AT5G50920.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
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Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0045037
ISS
Gene Ontologyprotein import into chloroplast stroma1
GO:0009658
ISS
Gene Ontologychloroplast organization1

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005515
IPI
Gene Ontologyprotein binding2
GO:0016887
IDA
Gene OntologyATP hydrolysis activity3
GO:0016887
IEA
InterProATP hydrolysis activity
GO:0005524
IEA
GOA DatabaseATP binding
GO:0005524
IEA
InterProATP binding
GO:0000166
IEA
GOA Databasenucleotide binding
GO:0016787
IEA
GOA Databasehydrolase activity

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0016020
IEA
GOA Databasemembrane
GO:0009507
IEA
GOA Databasechloroplast
GO:0009507
IDA, HDA
ISM
Gene Ontologychloroplast1 4
GO:0009536
IDA
IEA
GOA Databaseplastid
GO:0009536
HDA
Gene Ontologyplastid5
GO:0005739
IDA
GOA Databasemitochondrion
GO:0005739
HDA
Gene Ontologymitochondrion6
GO:0009941
IDA
GOA Databasechloroplast envelope
GO:0009941
HDA
Gene Ontologychloroplast envelope7
GO:0031969
IEA
GOA Databasechloroplast membrane
GO:0009570
IEA
GOA Databasechloroplast stroma
GO:0009570
IDA, HDA
Gene Ontologychloroplast stroma8 9
GO:0032991
IDA
Gene Ontologyprotein-containing complex3
GO:0009532
IDA
Gene Ontologyplastid stroma10

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR027417 P-loop containing nucleoside triphosphate hydrolase
IPR003593 AAA+ ATPase domain
IPR003959 ATPase, AAA-type, core
IPR019489 Clp ATPase, C-terminal
IPR036628 Clp, N-terminal domain superfamily
IPR004176 Clp, repeat (R) domain
IPR041546 ClpA/ClpB, AAA lid domain
IPR001270 ClpA/B family
Mapman id Description
19.4.2.9.4 Protein homeostasis.proteolysis.serine-type peptidase activities.chloroplast Clp-type protease complex.chaperone component ClpC