Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A05p07160 Brassica napus
Aa31LG5G20450 Aethionema arabicum
Aa31LG5G20460 Aethionema arabicum
Actinidia34805 Actinidia chinensis
Ah.02g128110 Amaranthus hybridus
AL4G36440 Arabidopsis lyrata
Aqoxy1G01144 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.21BGD2 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.KFTR8M Arachis hypogaea
AT2G39140 Arabidopsis thaliana
AT3G43340 Arabidopsis thaliana
ATR0219G015 Amborella trichopoda
AUR62002759 Chenopodium quinoa
AUR62014125 Chenopodium quinoa
BcaB02g09141 Brassica carinata
BcaC02g12042 Brassica carinata
BolC4t22452H Brassica oleracea
BraA05t19681Z Brassica rapa
C04p08570 Brassica napus
CAN.G176.13 Capsicum annuum
CAN.G184.4 Capsicum annuum
CAN.G321.64 Capsicum annuum
CANSAT56G2601 Cannabis sativa
CARHR133910 Cardamine hirsuta
Carub.0004s2119 Capsella rubella
Ca_10544_v3 Cicer arietinum L.
CBR_g29624 Chara braunii
Cc02_g10940 Coffea canephora
CDE03G0204 Ceratophyllum demersum
Cfa001678 Carpinus fangiana
Cfa001679 Carpinus fangiana
Ciclev10031516m.g Citrus clementina
CiPaw.01G268700 Carya illinoinensis
ClCG08G007690 Citrullus lanatus
COL.COLO4_17136 Corchorus olitorius
Cpa.g.sc53.128 Carica papaya
Cre02.g095121 Chlamydomonas reinhardtii
Cre07.g323550 Chlamydomonas reinhardtii
CsaV3_6G036680 Cucumis sativus L.
CSS0005771 Camellia sinensis var. sinensis
DCAR_005490 Daucus carota
Dinv31231 Davidia involucrata
Duzib114G0755 Durio zibethinus
ECA238G1295 Erigeron canadensis
EL10Ac4g09587 Beta vulgaris
EL10Ac6g14260 Beta vulgaris
Eucgr.G02867 Eucalyptus grandis
FAN01G2166 Fragaria x ananassa
FAN06G0494 Fragaria x ananassa
FAN06G3910 Fragaria x ananassa
FAN10G0068 Fragaria x ananassa
FAN10G3782 Fragaria x ananassa
FvH4_7g18810 Fragaria vesca
Glyma.10G207800 Glycine max
Glyma.20G182966 Glycine max
Glyma.20G183032 Glycine max
Gohir.A10G203300 Gossypium hirsutum
Gohir.D10G211400 Gossypium hirsutum
Gorai.011G237100 Gossypium raimondii
GSVIVG01016221001 Vitis vinifera
HanXRQChr14g0456591 Helianthus annuus
Haze_16856 Corylus avellana
Hma1.2p1_2894F.1_g329960 Hydrangea macrophylla
Hma1.2p1_2894F.1_g329970 Hydrangea macrophylla
Hma1.2p1_2894F.1_g329973 Hydrangea macrophylla
HPP92_026018 Vanilla planifolia
HPP92_026744 Vanilla planifolia
HPP92_027741 Vanilla planifolia
Hund20700 Selenicereus undatus
Lalb_Chr21g0313531 Lupinus albus
Lalb_Chr21g0313541 Lupinus albus
Lalb_Chr21g0313671 Lupinus albus
Lj3A938T44 Lonicera japonica
Lj5g0015116 Lotus japonicus
Lsat_1_v5_gn_2_113040 Lactuca sativa
Manes.05G201000 Manihot esculenta
Mapoly0002s0007 Marchantia polymorpha
MBI18_g02633_MAGBIO Magnolia biondii
MCO01G641 Micromonas commoda
MCO04G216 Micromonas commoda
MCO14G528 Micromonas commoda
MD07G1170000 Malus domestica
Medtr1g094190 Medicago truncatula
MELO3C019822.2 Cucumis melo
Migut.F01702 Erythranthe guttata
MSTRG.389 Avicennia marina
Nitab4.5_0001450g0040 Nicotiana tabacum
Nitab4.5_0001659g0150 Nicotiana tabacum
Nn6g35280 Nelumbo nucifera
Oeu013841.1 Olea europaea
Os03g0152700 Oryza sativa ssp. japonica
Peaxi162Scf00145g01311 Petunia axillaris
PGR142G3823 Punica granatum
PGSC0003DMG400007434 Solanum tuberosum
Phvul.007G098900 Phaseolus vulgaris
Potri.008G035500 Populus trichocarpa
Potri.010G226801 Populus trichocarpa
Potri.010G226901 Populus trichocarpa
Pp3c7_13640 Physcomitrium patens
Pp3s196_90 Physcomitrium patens
PRCOL_00004574 Prasinoderma coloniale
PRCOL_00006422 Prasinoderma coloniale
Prupe.2G208900 Prunus persica
Psat6g180040 Pisum sativum
PSO063G6532 Papaver somniferum
PSO339G5012 Papaver somniferum
QL08p054383 Quercus lobata
QL08p054507 Quercus lobata
RcHm_v2.0_Chr1g0362601 Rosa chinensis
Sabra08G0023700 Salix brachista
SalBow6G7241 Salvia bowleyana
Sc09g0006060 Simmondsia chinensis
Sed0004104 Sechium edule
SGA_v2.0_scaffold51G18714 Striga asiatica
SMO329G0071 Selaginella moellendorffii
Solyc11g008360.3 Solanum lycopersicum
Sopen11g004170 Solanum pennellii
Sp4g21490 Schrenkiella parvula
TAR623G1379 Trochodendron aralioides
THA.LOC104824234 Tarenaya hassleriana
Thecc.10G083200 Theobroma cacao
Thhalv10016747m.g Eutrema salsugineum
TPR.G10288 Trifolium pratense
vmacro04842 Vaccinium macrocarpon
VMungo0251G3605 Vigna mungo
Zm00001eb004240 Zea mays

User provided reference genes

Program Settings