Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A05p21790 Brassica napus
A10p07730 Brassica napus
Aa31LG6G9500 Aethionema arabicum
Aa31LG6G9600 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_117.3544 Anthoceros agrestis
Actinidia15170 Actinidia chinensis
Actinidia15171 Actinidia chinensis
Actinidia16585 Actinidia chinensis
Ah.10g032080 Amaranthus hybridus
AL1G51980 Arabidopsis lyrata
Aqoxy6G00356 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.E7XDIB Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.HCD3KF Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.RY8QGI Arachis hypogaea
AT1G43860 Arabidopsis thaliana
ATR1136G011 Amborella trichopoda
Atru.chr13.1666 Acer truncatum
AUR62027497 Chenopodium quinoa
AUR62033983 Chenopodium quinoa
BcaB02g11416 Brassica carinata
BcaB07g33972 Brassica carinata
BcaC05g27657 Brassica carinata
BolC5t32377H Brassica oleracea
BraA01t00001Z Brassica rapa
BraA05t21100Z Brassica rapa
BraA06t27783Z Brassica rapa
BraSC36t46032Z Brassica rapa
C05p36450 Brassica napus
C06p00390 Brassica napus
C06p00420 Brassica napus
CAN.G657.3 Capsicum annuum
CANSAT54G1160 Cannabis sativa
CARHR035400 Cardamine hirsuta
Carub.0001s3480 Capsella rubella
Ca_25512_v3 Cicer arietinum L.
Ca_30116_v3 Cicer arietinum L.
CBR_g48721 Chara braunii
Cc10_g13130 Coffea canephora
CDE02G2089 Ceratophyllum demersum
CDE08G0468 Ceratophyllum demersum
Cfa018383 Carpinus fangiana
Ciclev10001639m.g Citrus clementina
CiPaw.16G018700 Carya illinoinensis
ClCG08G002740 Citrullus lanatus
COL.COLO4_33811 Corchorus olitorius
Cpa.g.sc13.102 Carica papaya
Cre01.g017500 Chlamydomonas reinhardtii
CsaV3_6G035600 Cucumis sativus L.
CSS0001186 Camellia sinensis var. sinensis
CSS0012113 Camellia sinensis var. sinensis
CSS0016864 Camellia sinensis var. sinensis
CSS0023189 Camellia sinensis var. sinensis
CSS0029081 Camellia sinensis var. sinensis
DCAR_015244 Daucus carota
DCAR_019815 Daucus carota
Dinv41137 Davidia involucrata
Duzib041G0013 Durio zibethinus
Duzib116G0940 Durio zibethinus
ECA233G2167 Erigeron canadensis
ECA233G3664 Erigeron canadensis
ECA234G0804 Erigeron canadensis
EL10Ac1g01450 Beta vulgaris
EL10Ac4g08872 Beta vulgaris
Eucgr.G02653 Eucalyptus grandis
FAN15G0656 Fragaria x ananassa
FAN20G2613 Fragaria x ananassa
FAN24G2486 Fragaria x ananassa
FAN27G1276 Fragaria x ananassa
FvH4_2g15010 Fragaria vesca
Glyma.11G142700 Glycine max
Glyma.14G119400 Glycine max
Gohir.A02G068100 Gossypium hirsutum
Gohir.D02G074100 Gossypium hirsutum
Gorai.005G083500 Gossypium raimondii
GSVIVG01010010001 Vitis vinifera
HanXRQChr04g0109491 Helianthus annuus
Haze_17689 Corylus avellana
HPP92_020498 Vanilla planifolia
HPP92_020501 Vanilla planifolia
Hund17388 Selenicereus undatus
Lalb_Chr02g0149921 Lupinus albus
Lalb_Chr21g0311851 Lupinus albus
Lj1g0018953 Lotus japonicus
Lj4A690T47 Lonicera japonica
Lj4g0018852 Lotus japonicus
Lsat_1_v5_gn_1_9740 Lactuca sativa
Manes.02G173400 Manihot esculenta
Mapoly0003s0227 Marchantia polymorpha
MCO07G375 Micromonas commoda
MD05G1011400 Malus domestica
MD05G1011500 Malus domestica
Medtr6g085170 Medicago truncatula
MELO3C010584.2 Cucumis melo
Migut.C01102 Erythranthe guttata
MSTRG.1382 Avicennia marina
Nitab4.5_0000174g0240 Nicotiana tabacum
Nitab4.5_0002972g0050 Nicotiana tabacum
Nn5g28553 Nelumbo nucifera
Oeu001556.2 Olea europaea
Oeu002392.1 Olea europaea
Os08g0107500 Oryza sativa ssp. japonica
Peaxi162Scf00066g01930 Petunia axillaris
PGR142G4097 Punica granatum
PGSC0003DMG400024852 Solanum tuberosum
Phvul.006G102500 Phaseolus vulgaris
Potri.002G073200 Populus trichocarpa
Potri.005G186700 Populus trichocarpa
Pp3c4_180 Physcomitrium patens
PRCOL_00006527 Prasinoderma coloniale
Prupe.8G016400 Prunus persica
Psat1g039480 Pisum sativum
PSO017G3306 Papaver somniferum
PSO421G0325 Papaver somniferum
PSO541G3185 Papaver somniferum
PSO673G0007 Papaver somniferum
PSO673G0037 Papaver somniferum
PSO675G6067 Papaver somniferum
PSO729G0072 Papaver somniferum
PSO729G0215 Papaver somniferum
QL09p029039 Quercus lobata
RcHm_v2.0_Chr2g0145391 Rosa chinensis
RcHm_v2.0_Chr6g0277561 Rosa chinensis
Rhsim03G0093500 Rhododendron simsii
Sabra05G0142600 Salix brachista
SalBow7G3864 Salvia bowleyana
Sc02g0004500 Simmondsia chinensis
Sed0001170 Sechium edule
SEGI_36163 Sequoiadendron giganteum
SGA_v2.0_scaffold25G11149 Striga asiatica
SHI09275 Sapria himalayana
SMO272G0010 Selaginella moellendorffii
SMO348G0060 Selaginella moellendorffii
Solyc04g064570.3 Solanum lycopersicum
Sopen04g026520 Solanum pennellii
Sp1g33080 Schrenkiella parvula
TAR381G0890 Trochodendron aralioides
THA.LOC104798858 Tarenaya hassleriana
Thecc.08G141200 Theobroma cacao
Thhalv10011594m.g Eutrema salsugineum
TPR.G31447 Trifolium pratense
TWI32G0322 Tripterygium wilfordii
TWI60G0144 Tripterygium wilfordii
unitig_747.g21501 Utricularia gibba
vmacro08710 Vaccinium macrocarpon
vmacro21119 Vaccinium macrocarpon
vmacro21120 Vaccinium macrocarpon
VMungo0540G1405 Vigna mungo
Zm00001eb260230 Zea mays

User provided reference genes

Program Settings