Gene: CANSAT54G1160

General Information

Structural Information

Species Cannabis sativa
Gene Identifier CANSAT54G1160
Transcript Identifier CANSAT54G1160.01
Gene Type Coding gene
Location NC_044375.1 : 90251586-90253372 : negative

Gene Family Information

Homologous GF
Orthologous GF

ID HOM05D005037
#Genes/#Species 148/98
Phylogenetic origin

ID ORTHO05D006274
#Genes/#Species 145/98
Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

tid rna-XM_030648796.1
pid XP_030504656.1
id gene-LOC115719671

Descriptions

Ortholog descriptions

Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO term	Evidence(s)	Provider(s)	Description	Source(s)
GO:0042254	IEA	InterPro	ribosome biogenesis
GO:0042256	IEA	InterPro	mature ribosome assembly
GO:0006355	ISO	PLAZA Integrative Orthology	regulation of transcription, DNA-templated	AT1G43860

Molecular Function

GO term	Evidence(s)	Provider(s)	Description	Source(s)
GO:0003676	IEA	InterPro	nucleic acid binding
GO:0008270	IEA	InterPro	zinc ion binding
GO:0000976	ISO	PLAZA Integrative Orthology	transcription cis-regulatory region binding	AT1G43860

Color Legend

Experimental Evidence

Computational Reviewed Evidence

Electronic Evidence

InterPro	Description
IPR036786	Ribosome maturation protein SBDS, N-terminal domain superfamily
IPR037188	Ribosome maturation protein Sdo1/SBDS, central domain superfamily
IPR003604	Matrin/U1-C-like, C2H2-type zinc finger
IPR018978	Ribosome maturation protein Sdo1/SBDS, C-terminal
IPR019783	Ribosome maturation protein Sdo1/SBDS, N-terminal
IPR002140	Ribosome maturation protein Sdo1/SBDS
IPR039100	Ribosome maturation protein Sdo1/SBDS-like

Mapman id	Description
17.1.2.2.3.5	Protein biosynthesis.ribosome biogenesis.large ribosomal subunit (LSU).LSU processome.60S ribosomal subunit cytoplasmic maturation.maturation factor (Sdo1)