Gene: CSS0001186

General Information

Structural Information

Species Camellia sinensis var. sinensis
Gene Identifier CSS0001186
Transcript Identifier CSS0001186.1
Gene Type Coding gene
Location Chr4 : 47631330-47637263 : negative

Gene Family Information

Homologous GF
Orthologous GF

ID HOM05D005037
#Genes/#Species 148/98
Phylogenetic origin

ID ORTHO05D006274
#Genes/#Species 145/98
Phylogenetic origin

Gene Duplication Information

Block Duplication Block duplicate

Labels

Identifiers

tid CSS0001186.1

Descriptions

Short descriptions
Ortholog descriptions

Description PREDICTED: ribosome maturation protein SBDS [Nelumbo nucifera]

Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO term	Evidence(s)	Provider(s)	Description	Source(s)
GO:0042254	IEA	InterPro	ribosome biogenesis
GO:0006662	IEA	InterPro	glycerol ether metabolic process
GO:0006355	ISO	PLAZA Integrative Orthology	regulation of transcription, DNA-templated	AT1G43860
GO:0042256	ISO	PLAZA Homology (enrichment)	mature ribosome assembly	HOM05D005037

Molecular Function

GO term	Evidence(s)	Provider(s)	Description	Source(s)
GO:0015035	IEA	InterPro	protein-disulfide reductase activity
GO:0000976	ISO	PLAZA Integrative Orthology	transcription cis-regulatory region binding	AT1G43860

Color Legend

Experimental Evidence

Computational Reviewed Evidence

Electronic Evidence

InterPro	Description
IPR036249	Thioredoxin-like superfamily
IPR019783	Ribosome maturation protein Sdo1/SBDS, N-terminal
IPR036786	Ribosome maturation protein SBDS, N-terminal domain superfamily
IPR018978	Ribosome maturation protein Sdo1/SBDS, C-terminal
IPR005746	Thioredoxin
IPR013766	Thioredoxin domain
IPR037188	Ribosome maturation protein Sdo1/SBDS, central domain superfamily
IPR036236	Zinc finger C2H2 superfamily
IPR039100	Ribosome maturation protein Sdo1/SBDS-like

Mapman id	Description
1.1.1.3.22	Photosynthesis.photophosphorylation.photosystem II.assembly.thioredoxin (TRX-M)
17.1.2.2.3.5	Protein biosynthesis.ribosome biogenesis.large ribosomal subunit (LSU).LSU processome.60S ribosomal subunit cytoplasmic maturation.maturation factor (Sdo1)