Gene: PSO729G0215
General Information
Structural Information
- Species Papaver somniferum
- Gene Identifier PSO729G0215
- Transcript Identifier PSO729G0215.01
- Gene Type Coding gene
- Location NW_020622270.1 : 3677576-3680157 : positive
Gene Family Information
- ID HOM05D005037
- #Genes/#Species 148/98
- Phylogenetic origin
- ID ORTHO05D006274
- #Genes/#Species 145/98
- Phylogenetic origin
Gene Duplication Information
- Tandem Duplication Tandem duplicate
Labels
Identifiers
- tid rna-XM_026578833.1
- pid XP_026434618.1
- id gene-LOC113332260
Descriptions
- product ribosome maturation protein SBDS-like, transcript variant X2
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0042254 | IEA | InterPro | ribosome biogenesis | |
| GO:0006355 | ISO | PLAZA Integrative Orthology | regulation of transcription, DNA-templated | AT1G43860 |
| GO:0042256 | ISO | PLAZA Homology (enrichment) | mature ribosome assembly | HOM05D005037 |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0000976 | ISO | PLAZA Integrative Orthology | transcription cis-regulatory region binding | AT1G43860 |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| InterPro | Description |
|---|---|
| IPR036786 | Ribosome maturation protein SBDS, N-terminal domain superfamily |
| IPR037188 | Ribosome maturation protein Sdo1/SBDS, central domain superfamily |
| IPR039100 | Ribosome maturation protein Sdo1/SBDS-like |
| IPR018978 | Ribosome maturation protein Sdo1/SBDS, C-terminal |
| IPR019783 | Ribosome maturation protein Sdo1/SBDS, N-terminal |
| Mapman id | Description |
|---|---|
| 17.1.2.2.3.5 | Protein biosynthesis.ribosome biogenesis.large ribosomal subunit (LSU).LSU processome.60S ribosomal subunit cytoplasmic maturation.maturation factor (Sdo1) |