Gene: SGA_v2.0_scaffold25G11149

General Information

Structural Information

Species Striga asiatica
Gene Identifier SGA_v2.0_scaffold25G11149
Transcript Identifier SGA_v2.0_scaffold25T11149
Gene Type Coding gene
Location scaffold25 : 2403757-2406094 : positive

Gene Family Information

Homologous GF
Orthologous GF

ID HOM05D005037
#Genes/#Species 148/98
Phylogenetic origin

ID ORTHO05D006274
#Genes/#Species 145/98
Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

Descriptions

Short descriptions
Ortholog descriptions

product Ribosome maturation protein SBDS

Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO term	Evidence(s)	Provider(s)	Description	Source(s)
GO:0042256	IEA	InterPro	mature ribosome assembly
GO:0042254	IEA	InterPro	ribosome biogenesis
GO:0006355	ISO	PLAZA Integrative Orthology	regulation of transcription, DNA-templated	AT1G43860

Molecular Function

GO term	Evidence(s)	Provider(s)	Description	Source(s)
GO:0003676	IEA	InterPro	nucleic acid binding
GO:0008270	IEA	InterPro	zinc ion binding
GO:0000976	ISO	PLAZA Integrative Orthology	transcription cis-regulatory region binding	AT1G43860

Color Legend

Experimental Evidence

Computational Reviewed Evidence

Electronic Evidence

InterPro	Description
IPR037188	Ribosome maturation protein Sdo1/SBDS, central domain superfamily
IPR003604	Matrin/U1-C-like, C2H2-type zinc finger
IPR036236	Zinc finger C2H2 superfamily
IPR036786	Ribosome maturation protein SBDS, N-terminal domain superfamily
IPR002140	Ribosome maturation protein Sdo1/SBDS
IPR018978	Ribosome maturation protein Sdo1/SBDS, C-terminal
IPR019783	Ribosome maturation protein Sdo1/SBDS, N-terminal
IPR039100	Ribosome maturation protein Sdo1/SBDS-like

Mapman id	Description
17.1.2.2.3.5	Protein biosynthesis.ribosome biogenesis.large ribosomal subunit (LSU).LSU processome.60S ribosomal subunit cytoplasmic maturation.maturation factor (Sdo1)