Gene: FAN24G2486

General Information

Structural Information

Species Fragaria x ananassa
Gene Identifier FAN24G2486
Transcript Identifier FAN24G2486.1
Gene Type Coding gene
Location Fvb2-2 : 11556502-11558856 : positive

Gene Family Information

Homologous GF
Orthologous GF

ID HOM05D005037
#Genes/#Species 148/98
Phylogenetic origin

ID ORTHO05D006274
#Genes/#Species 145/98
Phylogenetic origin

Gene Duplication Information

Block Duplication Block duplicate

Labels

Identifiers

id maker-Fvb2-2-augustus-gene-115.34.v1.0.a1
pacid 50549430

Descriptions

Short descriptions
Ortholog descriptions

Description K14574 - ribosome maturation protein SDO1 (SDO1, SBDS)

Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO term	Evidence(s)	Provider(s)	Description	Source(s)
GO:0042256	IEA	InterPro	mature ribosome assembly
GO:0042254	IEA	InterPro	ribosome biogenesis
GO:0006355	ISO	PLAZA Integrative Orthology	regulation of transcription, DNA-templated	AT1G43860

Molecular Function

GO term	Evidence(s)	Provider(s)	Description	Source(s)
GO:0003676	IEA	InterPro	nucleic acid binding
GO:0008270	IEA	InterPro	zinc ion binding
GO:0000976	ISO	PLAZA Integrative Orthology	transcription cis-regulatory region binding	AT1G43860

Color Legend

Experimental Evidence

Computational Reviewed Evidence

Electronic Evidence

InterPro	Description
IPR019783	Ribosome maturation protein Sdo1/SBDS, N-terminal
IPR037188	Ribosome maturation protein Sdo1/SBDS, central domain superfamily
IPR036236	Zinc finger C2H2 superfamily
IPR002140	Ribosome maturation protein Sdo1/SBDS
IPR039100	Ribosome maturation protein Sdo1/SBDS-like
IPR003604	Matrin/U1-C-like, C2H2-type zinc finger
IPR018978	Ribosome maturation protein Sdo1/SBDS, C-terminal
IPR036786	Ribosome maturation protein SBDS, N-terminal domain superfamily

Mapman id	Description
17.1.2.2.3.5	Protein biosynthesis.ribosome biogenesis.large ribosomal subunit (LSU).LSU processome.60S ribosomal subunit cytoplasmic maturation.maturation factor (Sdo1)