Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A03p29830 Brassica napus
A09p26740 Brassica napus
Aa31LG9G10030 Aethionema arabicum
Aa31LG9G10040 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_228.3786 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_228.3787 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_228.4075 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_228.4136 Anthoceros agrestis
Actinidia11880 Actinidia chinensis
Actinidia39269 Actinidia chinensis
AL6G47570 Arabidopsis lyrata
Aqoxy1G04110 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.0C9QHL Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.4A53N1 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.5H9H8Z Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.97WSNQ Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.C17RPB Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.GFC3N0 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.IIR6TV Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.JJ9PEA Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.N7GRQP Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.UE8YUV Arachis hypogaea
AT4G12610 Arabidopsis thaliana
ATR0751G086 Amborella trichopoda
Atru.chr1.2461 Acer truncatum
AUR62012783 Chenopodium quinoa
AUR62021872 Chenopodium quinoa
BcaB01g01757 Brassica carinata
BcaB01g02623 Brassica carinata
BcaC01g04577 Brassica carinata
BcaC04g21251 Brassica carinata
BolC3t15918H Brassica oleracea
BolC9t56221H Brassica oleracea
BraA03t12173Z Brassica rapa
BraA09t38246Z Brassica rapa
C03p36090 Brassica napus
C09p33830 Brassica napus
CAN.G1186.28 Capsicum annuum
CANSAT56G0590 Cannabis sativa
CARHR253550 Cardamine hirsuta
CARHR253560 Cardamine hirsuta
Carub.0006s3188 Capsella rubella
Ca_00718_v3 Cicer arietinum L.
CBR_g38329 Chara braunii
Cc09_g00920 Coffea canephora
CDE04G2591 Ceratophyllum demersum
CDE06G0619 Ceratophyllum demersum
CDE06G1774 Ceratophyllum demersum
Cfa000110 Carpinus fangiana
Ciclev10014841m.g Citrus clementina
CiPaw.09G102000 Carya illinoinensis
CiPaw.10G077600 Carya illinoinensis
ClCG07G001740 Citrullus lanatus
COL.COLO4_31876 Corchorus olitorius
Cpa.g.sc75.120 Carica papaya
CsaV3_3G028740 Cucumis sativus L.
CSS0007684 Camellia sinensis var. sinensis
CSS0032808 Camellia sinensis var. sinensis
DCAR_025996 Daucus carota
Dinv07398 Davidia involucrata
Duzib160G0220 Durio zibethinus
Duzib235G1223 Durio zibethinus
ECA233G3046 Erigeron canadensis
EL10Ac8g20176 Beta vulgaris
Eucgr.E03951 Eucalyptus grandis
FAN03G2951 Fragaria x ananassa
FAN11G3915 Fragaria x ananassa
FAN16G3024 Fragaria x ananassa
FAN21G0780 Fragaria x ananassa
FAN21G1015 Fragaria x ananassa
FAN21G1422 Fragaria x ananassa
FAN21G1676 Fragaria x ananassa
FAN24G0125 Fragaria x ananassa
FAN25G2646 Fragaria x ananassa
FAN25G3576 Fragaria x ananassa
FAN25G3770 Fragaria x ananassa
FvH4_2g22070 Fragaria vesca
FvH4_3g01042 Fragaria vesca
FvH4_3g04782 Fragaria vesca
Glyma.09G009900 Glycine max
Glyma.15G114200 Glycine max
Gohir.A06G153120 Gossypium hirsutum
Gohir.D01G119450 Gossypium hirsutum
Gohir.D06G159600 Gossypium hirsutum
Gorai.002G145900 Gossypium raimondii
Gorai.010G186300 Gossypium raimondii
GSVIVG01003352001 Vitis vinifera
HanXRQChr15g0470091 Helianthus annuus
Haze_08659 Corylus avellana
HPP92_001629 Vanilla planifolia
HPP92_001645 Vanilla planifolia
HPP92_001646 Vanilla planifolia
HPP92_001647 Vanilla planifolia
Hund23984 Selenicereus undatus
Lalb_Chr20g0119201 Lupinus albus
Lj2A262G45 Lonicera japonica
Lj4g0025543 Lotus japonicus
Lj6g0013016 Lotus japonicus
Lj8A171G42 Lonicera japonica
Lsat_1_v5_gn_7_13561 Lactuca sativa
Manes.07G088900 Manihot esculenta
Mapoly0105s0015 Marchantia polymorpha
MBI16_g42266_MAGBIO Magnolia biondii
MCO05G517 Micromonas commoda
MD05G1357300 Malus domestica
MD10G1331000 Malus domestica
Medtr2g025590 Medicago truncatula
Medtr2g025620 Medicago truncatula
MELO3C012788.2 Cucumis melo
Migut.M01390 Erythranthe guttata
MSTRG.7170 Avicennia marina
Nitab4.5_0000109g0490 Nicotiana tabacum
Nitab4.5_0000143g0310 Nicotiana tabacum
Nitab4.5_0001198g0010 Nicotiana tabacum
Nitab4.5_0006771g0010 Nicotiana tabacum
Nitab4.5_0013082g0020 Nicotiana tabacum
Nitab4.5_0013082g0030 Nicotiana tabacum
Nn1g03331 Nelumbo nucifera
Nn1g07354 Nelumbo nucifera
Oeu002760.2 Olea europaea
Oeu044421.3 Olea europaea
Peaxi162Scf00015g02110 Petunia axillaris
Peaxi162Scf00558g00516 Petunia axillaris
PGR102G0753 Punica granatum
PGSC0003DMG400013344 Solanum tuberosum
Phvul.003G083500 Phaseolus vulgaris
Phvul.006G143600 Phaseolus vulgaris
Potri.006G009100 Populus trichocarpa
Potri.016G015100 Populus trichocarpa
Pp3c3_2280 Physcomitrium patens
Prupe.4G011300 Prunus persica
Psat1g176560 Pisum sativum
PSO210G4264 Papaver somniferum
PSO302G0165 Papaver somniferum
PSO339G3925 Papaver somniferum
PSO339G5270 Papaver somniferum
PSO384G4333 Papaver somniferum
QL05p069776 Quercus lobata
QL09p006300 Quercus lobata
RcHm_v2.0_Chr5g0001581 Rosa chinensis
RcHm_v2.0_Chr5g0007791 Rosa chinensis
RcHm_v2.0_Chr6g0288941 Rosa chinensis
RcHm_v2.0_Chr6g0289201 Rosa chinensis
Rhsim13G0146600 Rhododendron simsii
RhsimUnG0025700 Rhododendron simsii
RhsimUnG0028500 Rhododendron simsii
RhsimUnG0109100 Rhododendron simsii
Sabra06G0006900 Salix brachista
Sabra16G0000900 Salix brachista
Sabra16G0017100 Salix brachista
SalBow8G5272 Salvia bowleyana
Sc17g0007710 Simmondsia chinensis
Sed0003006 Sechium edule
SEGI_18521 Sequoiadendron giganteum
SEGI_19210 Sequoiadendron giganteum
SEGI_29277 Sequoiadendron giganteum
SEGI_38016 Sequoiadendron giganteum
SGA_v2.0_scaffold4G01878 Striga asiatica
SHI24464 Sapria himalayana
Solyc11g012150.3 Solanum lycopersicum
Sopen11g006940 Solanum pennellii
Sp6g04900 Schrenkiella parvula
TAR624G0821 Trochodendron aralioides
TAR629G2548 Trochodendron aralioides
TAR629G2665 Trochodendron aralioides
THA.LOC104812992 Tarenaya hassleriana
Thecc.06G232700 Theobroma cacao
Thhalv10028564m.g Eutrema salsugineum
TPR.G13041 Trifolium pratense
TPR.G3343 Trifolium pratense
TPR.G34491 Trifolium pratense
TWI63G0294 Tripterygium wilfordii
unitig_748.g7103 Utricularia gibba
vmacro03646 Vaccinium macrocarpon
vmacro15772 Vaccinium macrocarpon
VMungo0540G1287 Vigna mungo
VMungo0720G0179 Vigna mungo
VMungo1215G3075 Vigna mungo
Zm00001eb224360 Zea mays
Zm00001eb398520 Zea mays

User provided reference genes

Program Settings