Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A03p30810 Brassica napus
A03p35350 Brassica napus
A05p40600 Brassica napus
A06p39270 Brassica napus
Aa31LG5G18180 Aethionema arabicum
Aa31LG5G2400 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_228.3099 Anthoceros agrestis
Actinidia00834 Actinidia chinensis
Actinidia10586 Actinidia chinensis
Actinidia21105 Actinidia chinensis
Actinidia30363 Actinidia chinensis
Ah.08g212130 Amaranthus hybridus
AL1G12710 Arabidopsis lyrata
AL3G18950 Arabidopsis lyrata
AL6G50090 Arabidopsis lyrata
Aqoxy6G02091 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.2BA4KG Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.3GK7M3 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.J7W4G4 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.S6MYLT Arachis hypogaea
AT3G07590 Arabidopsis thaliana
AT4G02840 Arabidopsis thaliana
ATR0751G159 Amborella trichopoda
Atru.chr12.1886 Acer truncatum
Atru.chr5.1398 Acer truncatum
AUR62039911 Chenopodium quinoa
BcaB03g14691 Brassica carinata
BcaB04g21281 Brassica carinata
BcaC01g04274 Brassica carinata
BcaC01g06725 Brassica carinata
BcaC05g29554 Brassica carinata
BolC1t05542H Brassica oleracea
BolC3t16040H Brassica oleracea
BolC3t16042H Brassica oleracea
BolC3t16565H Brassica oleracea
BolC5t34625H Brassica oleracea
BraA01t04372Z Brassica rapa
BraA03t12259Z Brassica rapa
BraA03t12714Z Brassica rapa
BraA05t22791Z Brassica rapa
BraA06t26841Z Brassica rapa
C03p37490 Brassica napus
C03p42970 Brassica napus
C05p59710 Brassica napus
CAN.G1009.1 Capsicum annuum
CAN.G1682.19 Capsicum annuum
CAN.G265.10 Capsicum annuum
CAN.G521.12 Capsicum annuum
CANSAT01G0406 Cannabis sativa
CARHR082290 Cardamine hirsuta
CARHR251210 Cardamine hirsuta
Carub.0003s0716 Capsella rubella
Carub.0006s3421 Capsella rubella
Ca_08574_v3 Cicer arietinum L.
Ca_09763_v3 Cicer arietinum L.
Cc00_g04450 Coffea canephora
Cc01_g19630 Coffea canephora
Ciclev10022934m.g Citrus clementina
CiPaw.07G092900 Carya illinoinensis
CiPaw.08G104400 Carya illinoinensis
ClCG11G018350 Citrullus lanatus
COL.COLO4_09117 Corchorus olitorius
COL.COLO4_19677 Corchorus olitorius
Cpa.g.sc136.74 Carica papaya
Cpa.g.sc52.16 Carica papaya
Cre16.g665400 Chlamydomonas reinhardtii
CsaV3_3G044470 Cucumis sativus L.
CSS0001477 Camellia sinensis var. sinensis
CSS0013297 Camellia sinensis var. sinensis
CSS0013483 Camellia sinensis var. sinensis
CSS0017273 Camellia sinensis var. sinensis
CSS0048356 Camellia sinensis var. sinensis
Dinv11245 Davidia involucrata
Dinv32947 Davidia involucrata
Dinv40899 Davidia involucrata
Duzib133G0526 Durio zibethinus
Duzib138G0852 Durio zibethinus
Duzib138G1649 Durio zibethinus
Duzib177G0571 Durio zibethinus
ECA247G0841 Erigeron canadensis
EL10Ac7g17224 Beta vulgaris
Eucgr.K03379 Eucalyptus grandis
FAN15G3011 Fragaria x ananassa
FAN20G0184 Fragaria x ananassa
FAN24G0719 Fragaria x ananassa
FAN27G2136 Fragaria x ananassa
FvH4_2g23760 Fragaria vesca
Glyma.02G096000 Glycine max
Glyma.03G152100 Glycine max
Glyma.18G285500 Glycine max
Glyma.19G154600 Glycine max
Gohir.A08G068500 Gossypium hirsutum
Gohir.A08G185700 Gossypium hirsutum
Gohir.A11G121800 Gossypium hirsutum
Gohir.A11G146900 Gossypium hirsutum
Gohir.A12G005600 Gossypium hirsutum
Gohir.D08G076900 Gossypium hirsutum
Gohir.D08G203800 Gossypium hirsutum
Gohir.D11G127000 Gossypium hirsutum
Gohir.D11G153600 Gossypium hirsutum
Gohir.D12G005100 Gossypium hirsutum
Gorai.004G081600 Gossypium raimondii
Gorai.004G215800 Gossypium raimondii
Gorai.007G135700 Gossypium raimondii
Gorai.007G163800 Gossypium raimondii
Gorai.008G005000 Gossypium raimondii
GSVIVG01011117001 Vitis vinifera
GSVIVG01014776001 Vitis vinifera
HanXRQChr04g0114581 Helianthus annuus
HanXRQChr10g0282791 Helianthus annuus
HanXRQChr11g0334551 Helianthus annuus
Haze_26890 Corylus avellana
Hma1.2p1_0628F.1_g192030 Hydrangea macrophylla
HPP92_015746 Vanilla planifolia
HPP92_015780 Vanilla planifolia
HPP92_018912 Vanilla planifolia
Hund05351 Selenicereus undatus
Hund17994 Selenicereus undatus
Lalb_Chr06g0163051 Lupinus albus
Lalb_Chr17g0336331 Lupinus albus
Lj1C45G8 Lonicera japonica
Lj1C898G18 Lonicera japonica
Lj1g0025963 Lotus japonicus
Lj5g0027009 Lotus japonicus
Lsat_1_v5_gn_7_116380 Lactuca sativa
Lsat_1_v5_gn_9_4121 Lactuca sativa
Manes.01G208900 Manihot esculenta
Manes.05G075000 Manihot esculenta
Mapoly0005s0217 Marchantia polymorpha
MBI14_g30900_MAGBIO Magnolia biondii
MCO07G160 Micromonas commoda
MD03G1267200 Malus domestica
MD11G1287700 Malus domestica
Medtr1g072370 Medicago truncatula
Medtr7g094680 Medicago truncatula
MELO3C018220.2 Cucumis melo
Migut.D00283 Erythranthe guttata
Migut.M01594 Erythranthe guttata
Migut.O00722 Erythranthe guttata
MSTRG.17439 Avicennia marina
MSTRG.7032 Avicennia marina
Nitab4.5_0000759g0100 Nicotiana tabacum
Nitab4.5_0001028g0110 Nicotiana tabacum
Nitab4.5_0008797g0020 Nicotiana tabacum
Nitab4.5_0014943g0020 Nicotiana tabacum
Nn1g07687 Nelumbo nucifera
Oeu006278.1 Olea europaea
Oeu013014.1 Olea europaea
Os02g0586500 Oryza sativa ssp. japonica
Peaxi162Scf00238g00082 Petunia axillaris
Peaxi162Scf00570g00713 Petunia axillaris
Peaxi162Scf00783g00331 Petunia axillaris
PGR044G1675 Punica granatum
PGR044G1843 Punica granatum
PGR102G2408 Punica granatum
PGSC0003DMG400020134 Solanum tuberosum
Phvul.001G149700 Phaseolus vulgaris
Phvul.008G016100 Phaseolus vulgaris
Potri.002G054800 Populus trichocarpa
Potri.005G207900 Populus trichocarpa
Pp3c13_22270 Physcomitrium patens
Pp3c5_16280 Physcomitrium patens
Pp3c9_610 Physcomitrium patens
PRCOL_00002131 Prasinoderma coloniale
Prupe.8G242900 Prunus persica
Psat3g065000 Pisum sativum
Psat6g060600 Pisum sativum
PSO541G4287 Papaver somniferum
PSO675G1536 Papaver somniferum
QL12p022157 Quercus lobata
RcHm_v2.0_Chr6g0291251 Rosa chinensis
Rhsim06G0234300 Rhododendron simsii
Sabra02G0044400 Salix brachista
Sabra05G0158300 Salix brachista
SalBow6G4986 Salvia bowleyana
Sc03g0011720 Simmondsia chinensis
Sed0001121 Sechium edule
Sed0026841 Sechium edule
SGA_v2.0_scaffold1G00460 Striga asiatica
SGA_v2.0_scaffold81G25987 Striga asiatica
SHI10189 Sapria himalayana
SMO118G0358 Selaginella moellendorffii
Solyc06g084310.4 Solanum lycopersicum
Solyc09g064660.4 Solanum lycopersicum
Sopen06g035700 Solanum pennellii
Sopen09g026350 Solanum pennellii
Sp2g18650 Schrenkiella parvula
Sp3g06530 Schrenkiella parvula
Sp6g02870 Schrenkiella parvula
TAR626G0272 Trochodendron aralioides
TAR627G0859 Trochodendron aralioides
THA.LOC104801227 Tarenaya hassleriana
THA.LOC104819017 Tarenaya hassleriana
Thecc.01G201400 Theobroma cacao
Thecc.01G281700 Theobroma cacao
Thhalv10005157m.g Eutrema salsugineum
Thhalv10021885m.g Eutrema salsugineum
Thhalv10029079m.g Eutrema salsugineum
TPR.G1587 Trifolium pratense
TPR.G6177 Trifolium pratense
TWI14G0594 Tripterygium wilfordii
TWI23G1159 Tripterygium wilfordii
TWI59G0904 Tripterygium wilfordii
unitig_744.g24078 Utricularia gibba
vmacro02561 Vaccinium macrocarpon
vmacro11632 Vaccinium macrocarpon
vmacro14929 Vaccinium macrocarpon
VMungo1383G0929 Vigna mungo
VMungo1383G3581 Vigna mungo
Zm00001eb080070 Zea mays
Zm00001eb183380 Zea mays
Zm00001eb424640 Zea mays

User provided reference genes

Program Settings