Gene: Duzib177G0571

General Information

Structural Information

  • Species Durio zibethinus
  • Gene Identifier Duzib177G0571
  • Transcript Identifier Duzib177G0571.02
  • Gene Type Coding gene
  • Location NW_019168004.1 : 2122740-2134869 : positive

Gene Family Information

  • ID HOM05D003232
  • #Genes/#Species 212/95
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • name LOC111276778
  • name XM_022862598.1
  • pid XP_022718333.1
  • id gene-LOC111276778
  • uniprot A0A6P5WS55

Descriptions

  • product uncharacterized LOC111276778, transcript variant X4
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006396
IEA
GOA DatabaseRNA processing
GO:0006396
IEA
InterProRNA processing
GO:0008380
ISO
PLAZA Integrative OrthologyRNA splicing AT4G02840
GO:0035194
ISO
PLAZA Integrative Orthologypost-transcriptional gene silencing by RNA AT3G07590
GO:0043484
ISO
PLAZA Integrative Orthologyregulation of RNA splicing AT4G02840
GO:0000387
ISO
PLAZA Homology (enrichment)spliceosomal snRNP assembly HOM05D003232

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003729
ISO
PLAZA Integrative OrthologymRNA binding AT4G02840

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0016021
IEA
GOA Databaseintegral component of membrane
GO:0016020
IEA
GOA Databasemembrane
GO:0005634
IEA
GOA Databasenucleus
GO:0016607
ISO
PLAZA Integrative Orthologynuclear speck AT3G07590
GO:0005829
ISO
PLAZA Integrative Orthologycytosol AT3G07590
GO:0005730
ISO
PLAZA Integrative Orthologynucleolus AT3G07590
GO:0005774
ISO
PLAZA Integrative Orthologyvacuolar membrane AT3G07590

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR010920 LSM domain superfamily
IPR001163 LSM domain, eukaryotic/archaea-type
IPR027141 Like-Sm (LSM) domain containing protein, LSm4/SmD1/SmD3
Mapman id Description
16.2.2.2 RNA processing.pre-mRNA splicing.U1/U2/U4/U5-associated Sm accessory ribonucleoprotein complex.component Sm-D1