Gene: Lalb_Chr17g0336331

General Information

Structural Information

  • Species Lupinus albus
  • Gene Identifier Lalb_Chr17g0336331
  • Transcript Identifier Lalb_Chr17g0336331
  • Gene Type Coding gene
  • Location Lalb_Chr17 : 793453-795665 : positive

Gene Family Information

  • ID HOM05D003232
  • #Genes/#Species 212/95
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • id Lalb_Chr17g0336331.v1
  • pacid 44550541
  • uniprot A0A6A4NSM7

Descriptions

  • Description K11087 - small nuclear ribonucleoprotein D1 (SNRPD1, SMD1)
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0000387
IEA
GOA Databasespliceosomal snRNP assembly
GO:0000387
IEA
InterProspliceosomal snRNP assembly
GO:0006397
IEA
GOA DatabasemRNA processing
GO:0008380
IEA
GOA DatabaseRNA splicing
GO:0006396
IEA
GOA DatabaseRNA processing
GO:0006396
IEA
InterProRNA processing
GO:0035194
ISO
PLAZA Integrative Orthologypost-transcriptional gene silencing by RNA AT3G07590
GO:0043484
ISO
PLAZA Integrative Orthologyregulation of RNA splicing AT4G02840

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003729
ISO
PLAZA Integrative OrthologymRNA binding AT4G02840

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
IEA
GOA Databasenucleus
GO:0016607
ISO
PLAZA Integrative Orthologynuclear speck AT3G07590
GO:0005829
ISO
PLAZA Integrative Orthologycytosol AT3G07590
GO:0005730
ISO
PLAZA Integrative Orthologynucleolus AT3G07590
GO:0005774
ISO
PLAZA Integrative Orthologyvacuolar membrane AT3G07590

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR027141 Like-Sm (LSM) domain containing protein, LSm4/SmD1/SmD3
IPR001163 LSM domain, eukaryotic/archaea-type
IPR034102 Small nuclear ribonucleoprotein D1
IPR010920 LSM domain superfamily
Mapman id Description
16.2.2.2 RNA processing.pre-mRNA splicing.U1/U2/U4/U5-associated Sm accessory ribonucleoprotein complex.component Sm-D1