Gene: Pp3c9_610

General Information

Structural Information

  • Species Physcomitrium patens
  • Gene Identifier Pp3c9_610
  • Transcript Identifier Pp3c9_610V3.1
  • Gene Type Coding gene
  • Location Chr09 : 332957-333854 : positive

Gene Family Information

  • ID HOM05D003232
  • #Genes/#Species 212/95
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • name Pp3c9_610V3.1
  • pacid 32911104
  • uniprot A0A2K1K1E5

Descriptions

  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0043484
ISO
PLAZA Integrative Orthologyregulation of RNA splicing AT4G02840
GO:0035194
ISO
PLAZA Integrative Orthologypost-transcriptional gene silencing by RNA AT3G07590
GO:0008380
ISO
PLAZA Integrative OrthologyRNA splicing AT4G02840
GO:0000387
IBA
GOA Databasespliceosomal snRNP assembly
GO:0006396
IEA
GOA DatabaseRNA processing
GO:0006396
IEA
InterProRNA processing

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003723
IBA
GOA DatabaseRNA binding
GO:0003729
ISO
PLAZA Integrative OrthologymRNA binding AT4G02840

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005774
ISO
PLAZA Integrative Orthologyvacuolar membrane AT3G07590
GO:0005730
ISO
PLAZA Integrative Orthologynucleolus AT3G07590
GO:0005829
ISO
PLAZA Integrative Orthologycytosol AT3G07590
GO:0016607
ISO
PLAZA Integrative Orthologynuclear speck AT3G07590
GO:0005634
ISO
PLAZA Integrative Orthologynucleus AT3G07590
GO:0097526
IBA
GOA Databasespliceosomal tri-snRNP complex
GO:0000243
IBA
GOA Databasecommitment complex
GO:0005682
IBA
GOA DatabaseU5 snRNP
GO:0005685
IBA
GOA DatabaseU1 snRNP
GO:0005686
IBA
GOA DatabaseU2 snRNP
GO:0005687
IBA
GOA DatabaseU4 snRNP
GO:0005689
IBA
GOA DatabaseU12-type spliceosomal complex
GO:0034715
IBA
GOA DatabasepICln-Sm protein complex
GO:0034719
IBA
GOA DatabaseSMN-Sm protein complex
GO:0071011
IBA
GOA Databaseprecatalytic spliceosome
GO:0071013
IBA
GOA Databasecatalytic step 2 spliceosome

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR010920 LSM domain superfamily
IPR027141 Like-Sm (LSM) domain containing protein, LSm4/SmD1/SmD3
Mapman id Description
35.2 not assigned.not annotate