Gene: Aa31LG5G2400

General Information

Structural Information

  • Species Aethionema arabicum
  • Gene Identifier Aa31LG5G2400
  • Transcript Identifier Aa31LG5G2400.mRNA1
  • Gene Type Coding gene
  • Location LG-5 : 945199-946358 : negative

Gene Family Information

  • ID HOM05D003232
  • #Genes/#Species 212/95
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Aa31LG5G2400.mRNA1
  • Alias Aa31LG5G2400
  • Alias Aa31LG5G2400-mRNA-1

Descriptions

  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006396
IEA
InterProRNA processing
GO:0000387
IEA
InterProspliceosomal snRNP assembly
GO:0008380
ISO
PLAZA Integrative OrthologyRNA splicing AT4G02840
GO:0035194
ISO
PLAZA Integrative Orthologypost-transcriptional gene silencing by RNA AT4G02840
GO:0043484
ISO
PLAZA Integrative Orthologyregulation of RNA splicing AT4G02840

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003729
ISO
PLAZA Integrative OrthologymRNA binding AT4G02840

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0016607
ISO
PLAZA Integrative Orthologynuclear speck AT4G02840
GO:0005730
ISO
PLAZA Integrative Orthologynucleolus AT4G02840
GO:0005774
ISO
PLAZA Integrative Orthologyvacuolar membrane AT4G02840

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR027141 Like-Sm (LSM) domain containing protein, LSm4/SmD1/SmD3
IPR010920 LSM domain superfamily
IPR001163 LSM domain, eukaryotic/archaea-type
IPR034102 Small nuclear ribonucleoprotein D1
Mapman id Description
16.2.2.2 RNA processing.pre-mRNA splicing.U1/U2/U4/U5-associated Sm accessory ribonucleoprotein complex.component Sm-D1