Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A06p16580 Brassica napus
A07p15600 Brassica napus
A07p41890 Brassica napus
Aa31LG4G6390 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_228.896 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_368.83 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_369.266 Anthoceros agrestis
Actinidia15494 Actinidia chinensis
Actinidia17044 Actinidia chinensis
Actinidia28603 Actinidia chinensis
Actinidia37920 Actinidia chinensis
Ah.01g023690 Amaranthus hybridus
AL1G33520 Arabidopsis lyrata
AL2G36390 Arabidopsis lyrata
Aqoxy5G01037 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.NVS6IC Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.SVUP05 Arachis hypogaea
AT1G20580 Arabidopsis thaliana
AT1G76300 Arabidopsis thaliana
ATR0661G400 Amborella trichopoda
Atru.chr13.140 Acer truncatum
AUR62004691 Chenopodium quinoa
AUR62011707 Chenopodium quinoa
AUR62012923 Chenopodium quinoa
AUR62023608 Chenopodium quinoa
BcaB03g12863 Brassica carinata
BcaB07g32057 Brassica carinata
BcaC05g25964 Brassica carinata
BcaC07g39041 Brassica carinata
BcaC08g47129 Brassica carinata
BcaC08g47267 Brassica carinata
BNapus_Darmor_BZH_scaffold_170p00090 Brassica napus
BolC5t30615H Brassica oleracea
BolC6t40069H Brassica oleracea
BolC7t42834H Brassica oleracea
BolC8t49651H Brassica oleracea
BraA06t24765Z Brassica rapa
BraA07t29299Z Brassica rapa
BraA07t31719Z Brassica rapa
C05p15190 Brassica napus
C05p19150 Brassica napus
C06p50320 Brassica napus
C07p22950 Brassica napus
C08p20220 Brassica napus
C09p42500 Brassica napus
CAN.G1365.2 Capsicum annuum
CAN.G1671.3 Capsicum annuum
CANSAT25G0152 Cannabis sativa
CANSAT64G1298 Cannabis sativa
CARHR021050 Cardamine hirsuta
CARHR069850 Cardamine hirsuta
Carub.0001s2007 Capsella rubella
Carub.0002s2319 Capsella rubella
Ca_17677_v3 Cicer arietinum L.
Ca_29603_v3 Cicer arietinum L.
CBR_g39570 Chara braunii
Cc00_g23360 Coffea canephora
Cc00_g34480 Coffea canephora
Cc00_g35500 Coffea canephora
Cc02_g33830 Coffea canephora
Cc02_g33850 Coffea canephora
Cc02_g33860 Coffea canephora
Cc07_g21070 Coffea canephora
Cc07_g21080 Coffea canephora
Cc07_g21090 Coffea canephora
Cc07_g21100 Coffea canephora
Cc07_g21110 Coffea canephora
Cc07_g21140 Coffea canephora
Cc07_g21150 Coffea canephora
CDE05G1714 Ceratophyllum demersum
CDE05G3019 Ceratophyllum demersum
Cfa014085 Carpinus fangiana
Ciclev10002830m.g Citrus clementina
CiPaw.07G138300 Carya illinoinensis
CiPaw.08G073600 Carya illinoinensis
ClCG11G018690 Citrullus lanatus
COL.COLO4_05221 Corchorus olitorius
COL.COLO4_28635 Corchorus olitorius
Cpa.g.sc801.3 Carica papaya
Cre10.g455300 Chlamydomonas reinhardtii
CsaV3_4G037220 Cucumis sativus L.
CSS0005946 Camellia sinensis var. sinensis
CSS0015226 Camellia sinensis var. sinensis
CSS0043026 Camellia sinensis var. sinensis
DCAR_009533 Daucus carota
DCAR_013917 Daucus carota
Dinv05529 Davidia involucrata
Dinv31947 Davidia involucrata
Dinv41881 Davidia involucrata
Duzib041G0259 Durio zibethinus
Duzib093G1878 Durio zibethinus
Duzib116G0833 Durio zibethinus
ECA233G2472 Erigeron canadensis
EL10Ac9g21252 Beta vulgaris
Eucgr.C04084 Eucalyptus grandis
FAN15G2035 Fragaria x ananassa
FAN20G2728 Fragaria x ananassa
FAN27G0967 Fragaria x ananassa
FvH4_2g37310 Fragaria vesca
Glyma.05G185800 Glycine max
Glyma.08G143900 Glycine max
Gohir.A01G105400 Gossypium hirsutum
Gohir.A02G084600 Gossypium hirsutum
Gohir.A05G179300 Gossypium hirsutum
Gohir.A10G117532 Gossypium hirsutum
Gohir.D01G091700 Gossypium hirsutum
Gohir.D02G100500 Gossypium hirsutum
Gohir.D05G182500 Gossypium hirsutum
Gorai.002G116800 Gossypium raimondii
Gorai.005G113900 Gossypium raimondii
Gorai.009G187800 Gossypium raimondii
GSVIVG01013364001 Vitis vinifera
GSVIVG01019262001 Vitis vinifera
GSVIVG01023894001 Vitis vinifera
GSVIVG01027881001 Vitis vinifera
HanXRQChr12g0367571 Helianthus annuus
HanXRQChr13g0409711 Helianthus annuus
Haze_22786 Corylus avellana
Haze_26945 Corylus avellana
Hma1.2p1_0507F.1_g168560 Hydrangea macrophylla
Hma1.2p1_1100F.1_g256990 Hydrangea macrophylla
HPP92_022158 Vanilla planifolia
Hund00358 Selenicereus undatus
Lalb_Chr08g0246401 Lupinus albus
Lalb_Chr11g0061601 Lupinus albus
Lalb_Chr23g0265771 Lupinus albus
Lj3g0021732 Lotus japonicus
Lj4A10T83 Lonicera japonica
Lj4A805T23 Lonicera japonica
Lj4g0014875 Lotus japonicus
Lsat_1_v5_gn_1_120980 Lactuca sativa
Lsat_1_v5_gn_2_4001 Lactuca sativa
Lsat_1_v5_gn_7_37160 Lactuca sativa
Lsat_1_v5_gn_8_26300 Lactuca sativa
Manes.05G133600 Manihot esculenta
Manes.05G133700 Manihot esculenta
Manes.18G004900 Manihot esculenta
Mapoly0014s0106 Marchantia polymorpha
MBI05_g07853_MAGBIO Magnolia biondii
MCO14G363 Micromonas commoda
MD08G1002200 Malus domestica
MD15G1001300 Malus domestica
Medtr8g092200 Medicago truncatula
MELO3C017020.2 Cucumis melo
Migut.J01784 Erythranthe guttata
Migut.K00070 Erythranthe guttata
MSTRG.26110 Avicennia marina
MSTRG.6449 Avicennia marina
Nitab4.5_0001133g0080 Nicotiana tabacum
Nitab4.5_0004254g0060 Nicotiana tabacum
Nitab4.5_0005721g0120 Nicotiana tabacum
Nitab4.5_0012215g0010 Nicotiana tabacum
Nn5g30951 Nelumbo nucifera
Nn6g31729 Nelumbo nucifera
Oeu008125.2 Olea europaea
Oeu033775.1 Olea europaea
Oeu058344.1 Olea europaea
Os02g0102700 Oryza sativa ssp. japonica
Os03g0240800 Oryza sativa ssp. japonica
Peaxi162Scf00010g00029 Petunia axillaris
Peaxi162Scf00083g00716 Petunia axillaris
Peaxi162Scf00439g01010 Petunia axillaris
PGR031G0751 Punica granatum
PGSC0003DMG400003559 Solanum tuberosum
PGSC0003DMG400019936 Solanum tuberosum
PGSC0003DMG400022564 Solanum tuberosum
Phvul.002G266900 Phaseolus vulgaris
Potri.002G010200 Populus trichocarpa
Potri.005G251100 Populus trichocarpa
Pp3c10_12880 Physcomitrium patens
Pp3c18_21750 Physcomitrium patens
Pp3c18_21790 Physcomitrium patens
Pp3c18_21880 Physcomitrium patens
Pp3c19_21580 Physcomitrium patens
Pp3c22_5760 Physcomitrium patens
PRCOL_00004720 Prasinoderma coloniale
Prupe.1G353900 Prunus persica
Psat7g049720 Pisum sativum
PSO541G6151 Papaver somniferum
PSO675G2974 Papaver somniferum
QL02p014285 Quercus lobata
RcHm_v2.0_Chr6g0304391 Rosa chinensis
Rhsim06G0006800 Rhododendron simsii
Rhsim07G0255000 Rhododendron simsii
RhsimUnG0172200 Rhododendron simsii
Sabra02G0007600 Salix brachista
Sabra05G0194200 Salix brachista
Sabra05G0194500 Salix brachista
SalBow1G1789 Salvia bowleyana
SalBow1G7550 Salvia bowleyana
SalBow6G1017 Salvia bowleyana
Sc14g0002430 Simmondsia chinensis
Sed0005519 Sechium edule
Sed0009612 Sechium edule
SEGI_35595 Sequoiadendron giganteum
SGA_v2.0_scaffold105G30448 Striga asiatica
SGA_v2.0_scaffold69G23095 Striga asiatica
SMO200G0123 Selaginella moellendorffii
Solyc02g062240.3 Solanum lycopersicum
Solyc02g084020.3 Solanum lycopersicum
Solyc03g033600.3 Solanum lycopersicum
Sopen02g013210 Solanum pennellii
Sopen02g028820 Solanum pennellii
Sopen03g006380 Solanum pennellii
Sp1g18290 Schrenkiella parvula
Sp5g31440 Schrenkiella parvula
TAR381G1070 Trochodendron aralioides
TAR628G0460 Trochodendron aralioides
THA.LOC104809773 Tarenaya hassleriana
THA.LOC104811465 Tarenaya hassleriana
Thecc.08G059700 Theobroma cacao
Thhalv10009078m.g Eutrema salsugineum
Thhalv10019312m.g Eutrema salsugineum
TPR.G2168 Trifolium pratense
TWI12G0703 Tripterygium wilfordii
TWI36G0363 Tripterygium wilfordii
TWI56G1280 Tripterygium wilfordii
vmacro04406 Vaccinium macrocarpon
vmacro21807 Vaccinium macrocarpon
VMungo0251G1496 Vigna mungo
Zm00001eb010240 Zea mays
Zm00001eb229320 Zea mays
Zm00001eb399040 Zea mays

User provided reference genes

Program Settings