Gene: Cc00_g35500

General Information

Structural Information

  • Species Coffea canephora
  • Gene Identifier Cc00_g35500
  • Transcript Identifier Cc00_g35500.1
  • Gene Type Coding gene
  • Location chr0 : 203720915-203721109 : positive

Gene Family Information

  • ID HOM05D003070
  • #Genes/#Species 223/98
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • UniProtKB P62320
  • UniProtKB P62318
  • UniProtKB P62323
  • id GSCOCG00001524001

Descriptions

  • Description snRNP core protein SMD3
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0000387
IEA
InterProspliceosomal snRNP assembly
GO:0006396
IEA
InterProRNA processing

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005681
IEA
InterProspliceosomal complex

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR034099 Small nuclear ribonucleoprotein Sm D3
IPR027141 Like-Sm (LSM) domain containing protein, LSm4/SmD1/SmD3
IPR010920 LSM domain superfamily
IPR001163 LSM domain, eukaryotic/archaea-type
Mapman id Description
16.2.2.4 RNA processing.pre-mRNA splicing.U1/U2/U4/U5-associated Sm accessory ribonucleoprotein complex.component Sm-D3