Gene: Zm00001eb399040

General Information

Structural Information

  • Species Zea mays
  • Gene Identifier Zm00001eb399040
  • Transcript Identifier Zm00001eb399040_T001
  • Gene Type Coding gene
  • Location 9 : 149770609-149774272 : negative

Gene Family Information

  • ID HOM05D003070
  • #Genes/#Species 223/98
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Zm00001eb399040_T001
  • pid Zm00001eb399040_P001
  • uniprot B4FKA5
  • uniprot A0A3L6DC74
  • entrez 100284316
  • refseq NP_001150683.1
  • refseq NM_001157211.1
  • V4_identifier Zm00001d047962

Descriptions

  • Description Zm00001e038613
  • Description Small nuclear ribonucleoprotein SmD3b
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0000387
IEA
GOA Databasespliceosomal snRNP assembly
GO:0000387
IEA
InterProspliceosomal snRNP assembly
GO:0006397
IEA
GOA DatabasemRNA processing
GO:0008380
IEA
GOA DatabaseRNA splicing
GO:0006396
IEA
GOA DatabaseRNA processing
GO:0006396
IEA
InterProRNA processing
GO:0048589
ISO
PLAZA Integrative Orthologydevelopmental growth AT1G20580
GO:0000398
ISO
PLAZA Integrative OrthologymRNA splicing, via spliceosome AT1G20580

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005829
IEA
GOA Databasecytosol
GO:0005634
IEA
GOA Databasenucleus
GO:0005737
IEA
GOA Databasecytoplasm
GO:0005681
IEA
GOA Databasespliceosomal complex
GO:0005681
IEA
InterProspliceosomal complex
GO:0016604
ISO
PLAZA Integrative Orthologynuclear body AT1G76300
GO:0005730
ISO
PLAZA Integrative Orthologynucleolus AT1G20580

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR010920 LSM domain superfamily
IPR027141 Like-Sm (LSM) domain containing protein, LSm4/SmD1/SmD3
IPR001163 LSM domain, eukaryotic/archaea-type
IPR034099 Small nuclear ribonucleoprotein Sm D3
Mapman id Description
16.2.2.4 RNA processing.pre-mRNA splicing.U1/U2/U4/U5-associated Sm accessory ribonucleoprotein complex.component Sm-D3