Gene: Lsat_1_v5_gn_1_120980

General Information

Structural Information

  • Species Lactuca sativa
  • Gene Identifier Lsat_1_v5_gn_1_120980
  • Transcript Identifier Lsat_1_v5_gn_1_120980.1
  • Gene Type Coding gene
  • Location Lsat_1_v8_lg_1 : 210147779-210148380 : negative

Gene Family Information

  • ID HOM05D003070
  • #Genes/#Species 223/98
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • id Lsat_1_v5_gn_1_120980.v5
  • pacid 38944112

Descriptions

  • Description PTHR23338//PTHR23338:SF26 - SMALL NUCLEAR RIBONUCLEOPROTEIN SM // SUBFAMILY NOT NAMED
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006396
IEA
InterProRNA processing
GO:0000387
ISO
PLAZA Homology (enrichment)spliceosomal snRNP assembly HOM05D003070

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005681
ISO
PLAZA Homology (enrichment)spliceosomal complex HOM05D003070

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR027141 Like-Sm (LSM) domain containing protein, LSm4/SmD1/SmD3
IPR001163 LSM domain, eukaryotic/archaea-type
IPR010920 LSM domain superfamily
Mapman id Description
16.2.2.4 RNA processing.pre-mRNA splicing.U1/U2/U4/U5-associated Sm accessory ribonucleoprotein complex.component Sm-D3