Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A01p02650 Brassica napus
A06p04050 Brassica napus
A07p02980 Brassica napus
Aa31LG10G4950 Aethionema arabicum
Aa31LG6G13040 Aethionema arabicum
Aa31LG8G15130 Aethionema arabicum
Actinidia26148 Actinidia chinensis
Actinidia28702 Actinidia chinensis
Actinidia30999 Actinidia chinensis
Ah.03g141740 Amaranthus hybridus
Ah.07g205030 Amaranthus hybridus
AL1G55850 Arabidopsis lyrata
AL3G50990 Arabidopsis lyrata
AL7G14950 Arabidopsis lyrata
AL8G35280 Arabidopsis lyrata
Aqoxy4G00078 Aquilegia oxysepala
Aqoxy6G00179 Aquilegia oxysepala
Aqoxy6G01563 Aquilegia oxysepala
Aqoxy7G00033 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.2M720R Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.G66ML0 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.U5HZVG Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.ZUG4EU Arachis hypogaea
AT1G48980 Arabidopsis thaliana
AT2G17970 Arabidopsis thaliana
AT4G36090 Arabidopsis thaliana
ATR0315G020 Amborella trichopoda
ATR0315G095 Amborella trichopoda
ATR0523G001 Amborella trichopoda
ATR0584G100 Amborella trichopoda
ATR0594G015 Amborella trichopoda
ATR0620G103 Amborella trichopoda
ATR0933G004 Amborella trichopoda
ATR1101G099 Amborella trichopoda
Atru.chr13.617 Acer truncatum
Atru.chr3.794 Acer truncatum
Atru.chr5.1556 Acer truncatum
Atru.chr6.625 Acer truncatum
Atru.chr8.2647 Acer truncatum
AUR62006047 Chenopodium quinoa
AUR62035581 Chenopodium quinoa
AUR62043238 Chenopodium quinoa
AUR62043716 Chenopodium quinoa
BcaB03g16577 Brassica carinata
BcaC06g36345 Brassica carinata
BcaC08g43104 Brassica carinata
BcaNung00765 Brassica carinata
BcaNung00766 Brassica carinata
BolC1t00280H Brassica oleracea
BolC1t00281H Brassica oleracea
BolC6t35513H Brassica oleracea
BolC7t40907H Brassica oleracea
BraA01t00251Z Brassica rapa
BraA06t23612Z Brassica rapa
BraA07t28094Z Brassica rapa
C01p02940 Brassica napus
C01p02950 Brassica napus
C06p03750 Brassica napus
C07p05090 Brassica napus
CAN.G1577.25 Capsicum annuum
CAN.G1671.9 Capsicum annuum
CAN.G576.4 Capsicum annuum
CANSAT01G1503 Cannabis sativa
CARHR038990 Cardamine hirsuta
CARHR108440 Cardamine hirsuta
CARHR244490 Cardamine hirsuta
Carub.0003s3209 Capsella rubella
Carub.0007s0414 Capsella rubella
Ca_00075_v3 Cicer arietinum L.
Ca_13086_v3 Cicer arietinum L.
CBR_g29851 Chara braunii
Cc07_g10650 Coffea canephora
CDE09G0927 Ceratophyllum demersum
Cfa005520 Carpinus fangiana
Cfa006968 Carpinus fangiana
Ciclev10001432m.g Citrus clementina
Ciclev10025381m.g Citrus clementina
CiPaw.05G049700 Carya illinoinensis
CiPaw.07G058100 Carya illinoinensis
CiPaw.08G132100 Carya illinoinensis
ClCG01G020250 Citrullus lanatus
ClCG05G009700 Citrullus lanatus
COL.COLO4_17858 Corchorus olitorius
COL.COLO4_21917 Corchorus olitorius
Cpa.g.sc6.243 Carica papaya
CsaV3_6G047040 Cucumis sativus L.
CSS0017949 Camellia sinensis var. sinensis
CSS0030818 Camellia sinensis var. sinensis
CSS0040682 Camellia sinensis var. sinensis
CSS0048561 Camellia sinensis var. sinensis
DCAR_021500 Daucus carota
DCAR_029248 Daucus carota
Dinv00772 Davidia involucrata
Dinv24284 Davidia involucrata
Dinv25314 Davidia involucrata
Dinv33626 Davidia involucrata
Dinv40081 Davidia involucrata
Duzib052G0037 Durio zibethinus
Duzib147G1511 Durio zibethinus
Duzib187G1364 Durio zibethinus
ECA234G4464 Erigeron canadensis
ECA246G0773 Erigeron canadensis
EL10Ac3g05221 Beta vulgaris
EL10As8g23836 Beta vulgaris
Eucgr.J02428 Eucalyptus grandis
FAN19G1925 Fragaria x ananassa
FAN23G1153 Fragaria x ananassa
FAN26G0856 Fragaria x ananassa
FAN28G2128 Fragaria x ananassa
FvH4_1g11920 Fragaria vesca
Glyma.08G186500 Glycine max
Glyma.14G106000 Glycine max
Glyma.17G220300 Glycine max
Gohir.A04G127600 Gossypium hirsutum
Gohir.A11G175700 Gossypium hirsutum
Gohir.D04G172300 Gossypium hirsutum
Gohir.D11G183500 Gossypium hirsutum
Gorai.007G195400 Gossypium raimondii
Gorai.012G161400 Gossypium raimondii
GSVIVG01018788001 Vitis vinifera
GSVIVG01022921001 Vitis vinifera
HanXRQChr10g0290621 Helianthus annuus
HanXRQChr16g0531291 Helianthus annuus
Haze_01660 Corylus avellana
Haze_01661 Corylus avellana
Haze_03770 Corylus avellana
Haze_11060 Corylus avellana
Hma1.2p1_0529F.1_g173270 Hydrangea macrophylla
Hma1.2p1_0743F.1_g211620 Hydrangea macrophylla
Hma1.2p1_1197F.1_g266110 Hydrangea macrophylla
HPP92_000818 Vanilla planifolia
HPP92_000820 Vanilla planifolia
Hund16488 Selenicereus undatus
Hund21030 Selenicereus undatus
Lalb_Chr14g0375441 Lupinus albus
Lalb_Chr23g0268091 Lupinus albus
Lalb_Chr24g0393721 Lupinus albus
Lj4C218G4 Lonicera japonica
Lj5g0010814 Lotus japonicus
Lj6g0007088 Lotus japonicus
Lj9A305T40 Lonicera japonica
Lsat_1_v5_gn_3_74260 Lactuca sativa
Lsat_1_v5_gn_5_105181 Lactuca sativa
Manes.01G145400 Manihot esculenta
Manes.02G103900 Manihot esculenta
Manes.07G016100 Manihot esculenta
Mapoly0001s0483 Marchantia polymorpha
MBI05_g15348_MAGBIO Magnolia biondii
MD02G1133100 Malus domestica
MD15G1245500 Malus domestica
MD15G1423500 Malus domestica
Medtr1g014720 Medicago truncatula
Medtr2g007060 Medicago truncatula
Medtr2g007120 Medicago truncatula
MELO3C007897.2 Cucumis melo
MELO3C019476.2 Cucumis melo
MELO3C019477.2 Cucumis melo
Migut.H02172 Erythranthe guttata
MSTRG.2709 Avicennia marina
Nitab4.5_0000188g0100 Nicotiana tabacum
Nitab4.5_0000816g0050 Nicotiana tabacum
Nitab4.5_0002337g0020 Nicotiana tabacum
Nitab4.5_0002337g0050 Nicotiana tabacum
Nitab4.5_0003271g0040 Nicotiana tabacum
Nitab4.5_0006286g0010 Nicotiana tabacum
Nitab4.5_0007514g0010 Nicotiana tabacum
Nn5g28266 Nelumbo nucifera
Nn5g30166 Nelumbo nucifera
Oeu035304.1 Olea europaea
Oeu062502.1 Olea europaea
Os06g0138200 Oryza sativa ssp. japonica
Peaxi162Scf00011g00427 Petunia axillaris
Peaxi162Scf00083g00623 Petunia axillaris
PGR102G0419 Punica granatum
PGR119G0459 Punica granatum
PGSC0003DMG400003560 Solanum tuberosum
PGSC0003DMG400023794 Solanum tuberosum
PGSC0003DMG400023875 Solanum tuberosum
Phvul.001G044000 Phaseolus vulgaris
Phvul.006G214800 Phaseolus vulgaris
Potri.005G114800 Populus trichocarpa
Potri.007G012200 Populus trichocarpa
Prupe.1G569500 Prunus persica
Prupe.7G167600 Prunus persica
Psat6g024280 Pisum sativum
PSO384G1284 Papaver somniferum
PSO384G3029 Papaver somniferum
PSO384G4471 Papaver somniferum
PSO541G0765 Papaver somniferum
PSO675G5159 Papaver somniferum
PSO675G5671 Papaver somniferum
QL06p032625 Quercus lobata
QL11p018537 Quercus lobata
RcHm_v2.0_Chr2g0099521 Rosa chinensis
Rhsim08G0033900 Rhododendron simsii
Sabra05G0094000 Salix brachista
Sabra07G0009500 Salix brachista
SalBow3G2907 Salvia bowleyana
Sc16g0002130 Simmondsia chinensis
Sc19g0000740 Simmondsia chinensis
Sed0005535 Sechium edule
Sed0006416 Sechium edule
Sed0016265 Sechium edule
SGA_v2.0_scaffold76G25151 Striga asiatica
SHI08558 Sapria himalayana
SHI08559 Sapria himalayana
SHI16662 Sapria himalayana
SMO364G0621 Selaginella moellendorffii
Solyc01g104130.4 Solanum lycopersicum
Solyc02g062180.3 Solanum lycopersicum
Solyc02g083960.4 Solanum lycopersicum
Sopen01g046560 Solanum pennellii
Sopen02g013150 Solanum pennellii
Sopen02g028760 Solanum pennellii
Sp1g35890 Schrenkiella parvula
Sp3g31380 Schrenkiella parvula
Sp7g33870 Schrenkiella parvula
TAR365G0855 Trochodendron aralioides
TAR365G1259 Trochodendron aralioides
TAR628G0178 Trochodendron aralioides
TAR628G0515 Trochodendron aralioides
TAR628G1586 Trochodendron aralioides
TAR628G1682 Trochodendron aralioides
TAR636G0532 Trochodendron aralioides
TAR636G0736 Trochodendron aralioides
TAR636G1209 Trochodendron aralioides
THA.LOC104819751 Tarenaya hassleriana
Thecc.01G019600 Theobroma cacao
Thecc.02G037900 Theobroma cacao
Thhalv10012104m.g Eutrema salsugineum
Thhalv10022661m.g Eutrema salsugineum
TPR.G15024 Trifolium pratense
TPR.G2062 Trifolium pratense
TPR.G38850 Trifolium pratense
TWI09G0155 Tripterygium wilfordii
TWI23G1197 Tripterygium wilfordii
TWI53G0573 Tripterygium wilfordii
TWI60G1510 Tripterygium wilfordii
TWI73G0572 Tripterygium wilfordii
TWI79G0578 Tripterygium wilfordii
unitig_52.g17251 Utricularia gibba
vmacro18417 Vaccinium macrocarpon
vmacro19890 Vaccinium macrocarpon
VMungo0540G1515 Vigna mungo
VMungo0647G2487 Vigna mungo
Zm00001eb377750 Zea mays

User provided reference genes

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