Gene: AT4G36090

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier AT4G36090
  • Transcript Identifier AT4G36090.3
  • Gene Type Coding gene
  • Location Chr4 : 17078376-17080670 : negative

Gene Family Information

  • ID HOM05D002822
  • #Genes/#Species 246/94
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid AT4G36090.3
  • uniprot Q5RJC7

Descriptions

  • Description oxidoreductase, 2OG-Fe(II) oxygenase family protein
  • Computational description oxidoreductase, 2OG-Fe(II) oxygenase family protein; BEST Arabidopsis thaliana protein match is: 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein (TAIR:AT2G17970.1); Has 178 Blast hits to 178 proteins in 44 species: Archae - 0; Bacteria - 0; Metazoa - 49; Fungi - 0; Plants - 122; Viruses - 0; Other Eukaryotes - 7 (source: NCBI BLink).
  • Computational description oxidoreductase, 2OG-Fe(II) oxygenase family protein; BEST Arabidopsis thaliana protein match is: 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein (TAIR:AT2G17970.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
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Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006402
IEA
Gene OntologymRNA catabolic process
GO:0006402
IEA
InterPromRNA catabolic process
GO:0070988
IEA
GOA Databasedemethylation

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003729
IDA
IEA
Gene OntologymRNA binding1
GO:0003729
IEA
InterPromRNA binding
GO:0032451
IEA
Gene Ontologydemethylase activity
GO:0032451
IEA
InterProdemethylase activity

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
ISM
Gene Ontologynucleus

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR027450 Alpha-ketoglutarate-dependent dioxygenase AlkB-like
IPR037151 Alpha-ketoglutarate-dependent dioxygenase AlkB-like superfamily
IPR044842 RNA demethylase ALKBH9B/ALKBH10B-like
Mapman id Description
16.5.8.3.1 RNA processing.RNA modification.mRNA methylation.N6-methyladenosine demethylation.demethylase (ALKBH9)