Gene: Solyc02g062180.3
General Information
Structural Information
- Species Solanum lycopersicum
- Gene Identifier Solyc02g062180.3
- Transcript Identifier Solyc02g062180.3.1
- Gene Type Coding gene
- Location SL4.0ch02 : 31744670-31748658 : negative
Gene Family Information
- ID HOM05D002822
- #Genes/#Species 246/94
- Phylogenetic origin
- ID ORTHO05D003179
- #Genes/#Species 239/94
- Phylogenetic origin
Gene Duplication Information
- Block Duplication Block duplicate
Labels
Identifiers
- tid Solyc02g062180.3.1
- uniprot A0A3Q7EYK0
- gene_id Solyc02g062180
Descriptions
- Description 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein (AHRD V3.3 *-* A0A2U1N614_ARTAN)
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0006402 | IEA | GOA Database | mRNA catabolic process | |
| GO:0006402 | IEA | InterPro | mRNA catabolic process | |
| GO:0070988 | IEA | GOA Database | demethylation |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0003729 | IEA | GOA Database | mRNA binding | |
| GO:0003729 | IEA | InterPro | mRNA binding | |
| GO:0032451 | IEA | GOA Database | demethylase activity | |
| GO:0032451 | IEA | InterPro | demethylase activity | |
| GO:0005515 | ISO | PLAZA Integrative Orthology | protein binding | AT2G17970 |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0009506 | ISO | PLAZA Integrative Orthology | plasmodesma | AT2G17970 |
| GO:0000932 | ISO | PLAZA Integrative Orthology | P-body | AT2G17970 |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| Mapman id | Description |
|---|---|
| 16.5.8.3.1 | RNA processing.RNA modification.mRNA methylation.N6-methyladenosine demethylation.demethylase (ALKBH9) |