Gene: PGSC0003DMG400023875

General Information

Structural Information

  • Species Solanum tuberosum
  • Gene Identifier PGSC0003DMG400023875
  • Transcript Identifier PGSC0003DMT400061354
  • Gene Type Coding gene
  • Location ST4.03ch02 : 20237074-20241204 : negative

Gene Family Information

  • ID HOM05D002822
  • #Genes/#Species 246/94
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • pacid 37428440
  • id PGSC0003DMG400023875.v4.03
  • uniprot M1C7D5

Descriptions

  • Description Oxidoreductase
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006402
IEA
GOA DatabasemRNA catabolic process
GO:0006402
IEA
InterPromRNA catabolic process
GO:0070988
IEA
GOA Databasedemethylation

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003729
IEA
GOA DatabasemRNA binding
GO:0003729
IEA
InterPromRNA binding
GO:0032451
IEA
GOA Databasedemethylase activity
GO:0032451
IEA
InterProdemethylase activity
GO:0005515
ISO
PLAZA Integrative Orthologyprotein binding AT2G17970

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0009506
ISO
PLAZA Integrative Orthologyplasmodesma AT2G17970
GO:0000932
ISO
PLAZA Integrative OrthologyP-body AT2G17970

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR027450 Alpha-ketoglutarate-dependent dioxygenase AlkB-like
IPR037151 Alpha-ketoglutarate-dependent dioxygenase AlkB-like superfamily
IPR044842 RNA demethylase ALKBH9B/ALKBH10B-like
Mapman id Description
16.5.8.3.1 RNA processing.RNA modification.mRNA methylation.N6-methyladenosine demethylation.demethylase (ALKBH9)