Gene: Solyc01g104130.4

General Information

Structural Information

  • Species Solanum lycopersicum
  • Gene Identifier Solyc01g104130.4
  • Transcript Identifier Solyc01g104130.4.1
  • Gene Type Coding gene
  • Location SL4.0ch01 : 84907893-84910613 : positive

Gene Family Information

  • ID HOM05D002822
  • #Genes/#Species 246/94
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Solyc01g104130.4.1
  • uniprot A0A3Q7FAH4
  • gene_id Solyc01g104130

Descriptions

  • Description 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein (AHRD V3.3 *** A0A2U1N614_ARTAN)
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006402
IEA
GOA DatabasemRNA catabolic process
GO:0006402
IEA
InterPromRNA catabolic process
GO:0070988
IEA
GOA Databasedemethylation

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003729
IEA
GOA DatabasemRNA binding
GO:0003729
IEA
InterPromRNA binding
GO:0032451
IEA
GOA Databasedemethylase activity
GO:0032451
IEA
InterProdemethylase activity

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR037151 Alpha-ketoglutarate-dependent dioxygenase AlkB-like superfamily
IPR044842 RNA demethylase ALKBH9B/ALKBH10B-like
IPR027450 Alpha-ketoglutarate-dependent dioxygenase AlkB-like
Mapman id Description
16.5.8.3.1 RNA processing.RNA modification.mRNA methylation.N6-methyladenosine demethylation.demethylase (ALKBH9)