Gene: vmacro18417

General Information

Structural Information

  • Species Vaccinium macrocarpon
  • Gene Identifier vmacro18417
  • Transcript Identifier vmacro18417-RA
  • Gene Type Coding gene
  • Location chr3_Vaccinium_macrocarpon_Stevens_v1 : 4458448-4463375 : negative

Gene Family Information

  • ID HOM05D002822
  • #Genes/#Species 246/94
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • id vmacro18417_Vaccinium_macrocarpon_Stevens_v1

Descriptions

  • Description Similar to ALKBH9B: RNA demethylase ALKBH9B (Arabidopsis thaliana OX=3702)
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006402
IEA
InterPromRNA catabolic process
GO:0070988
ISO
PLAZA Integrative Orthologydemethylation AT2G17970

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003729
IEA
InterPromRNA binding
GO:0032451
IEA
InterProdemethylase activity
GO:0005515
ISO
PLAZA Integrative Orthologyprotein binding AT2G17970

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0009506
ISO
PLAZA Integrative Orthologyplasmodesma AT2G17970
GO:0000932
ISO
PLAZA Integrative OrthologyP-body AT2G17970

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR044842 RNA demethylase ALKBH9B/ALKBH10B-like
IPR027450 Alpha-ketoglutarate-dependent dioxygenase AlkB-like
IPR037151 Alpha-ketoglutarate-dependent dioxygenase AlkB-like superfamily
Mapman id Description
16.5.8.3.1 RNA processing.RNA modification.mRNA methylation.N6-methyladenosine demethylation.demethylase (ALKBH9)