Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A01p27550 Brassica napus
A01p31760 Brassica napus
A02p00970 Brassica napus
A08p37170 Brassica napus
A10p02420 Brassica napus
Aa31LG1G9080 Aethionema arabicum
Aa31LG8G9790 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_117.1446 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_368.1943 Anthoceros agrestis
Actinidia09551 Actinidia chinensis
Actinidia17927 Actinidia chinensis
Actinidia21369 Actinidia chinensis
Actinidia25787 Actinidia chinensis
Actinidia27693 Actinidia chinensis
Actinidia35120 Actinidia chinensis
Actinidia35121 Actinidia chinensis
Actinidia37698 Actinidia chinensis
Ah.11g049740 Amaranthus hybridus
AL2G22710 Arabidopsis lyrata
AL5G24640 Arabidopsis lyrata
AL7G13900 Arabidopsis lyrata
AL7G32510 Arabidopsis lyrata
Aqoxy1G01999 Aquilegia oxysepala
Aqoxy3G00769 Aquilegia oxysepala
Aqoxy3G00770 Aquilegia oxysepala
Aqoxy4G01060 Aquilegia oxysepala
Aqoxy5G00246 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.6757N5 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.CP8RLS Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.NU732K Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.PE31ZG Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.TV98JP Arachis hypogaea
AT1G65660 Arabidopsis thaliana
AT3G45950 Arabidopsis thaliana
AT4G37120 Arabidopsis thaliana
ATR0736G013 Amborella trichopoda
ATR0736G117 Amborella trichopoda
Atru.chr4.2059 Acer truncatum
Atru.chr4.2060 Acer truncatum
Atru.chr5.1686 Acer truncatum
Atru.chr5.1687 Acer truncatum
AUR62011871 Chenopodium quinoa
AUR62024715 Chenopodium quinoa
AUR62027753 Chenopodium quinoa
BcaB04g20459 Brassica carinata
BcaC01g01966 Brassica carinata
BcaC05g24488 Brassica carinata
BcaC05g24491 Brassica carinata
BcaC07g36937 Brassica carinata
BcaC09g49274 Brassica carinata
BolC1t04020H Brassica oleracea
BolC2t06467H Brassica oleracea
BolC3t19262H Brassica oleracea
BolC4t25654H Brassica oleracea
BolC5t28999H Brassica oleracea
BolC7t40887H Brassica oleracea
BolC8t46880H Brassica oleracea
BraA01t02893Z Brassica rapa
BraA01t03301Z Brassica rapa
BraA08t35617Z Brassica rapa
BraA10t42511Z Brassica rapa
C01p40650 Brassica napus
C02p05130 Brassica napus
C02p05170 Brassica napus
C03p70030 Brassica napus
C03p73490 Brassica napus
C05p02240 Brassica napus
C07p04880 Brassica napus
C08p00820 Brassica napus
CAN.G1967.1 Capsicum annuum
CAN.G1967.2 Capsicum annuum
CAN.G771.27 Capsicum annuum
CAN.G896.8 Capsicum annuum
CANSAT01G1751 Cannabis sativa
CANSAT78G1053 Cannabis sativa
CARHR057480 Cardamine hirsuta
CARHR210860 Cardamine hirsuta
CARHR215740 Cardamine hirsuta
CARHR228230 Cardamine hirsuta
CARHR245390 Cardamine hirsuta
CARHR245400 Cardamine hirsuta
Carub.0002s1150 Capsella rubella
Carub.0003s2349 Capsella rubella
Carub.0005s1179 Capsella rubella
Carub.0007s0331 Capsella rubella
Carub.0137s0002 Capsella rubella
Ca_08675_v3 Cicer arietinum L.
Ca_08694_v3 Cicer arietinum L.
Ca_08701_v3 Cicer arietinum L.
CBR_g52748 Chara braunii
CBR_g54768 Chara braunii
Cc01_g18360 Coffea canephora
CDE04G1360 Ceratophyllum demersum
CDE04G1499 Ceratophyllum demersum
Cfa002423 Carpinus fangiana
Cfa024276 Carpinus fangiana
Ciclev10004803m.g Citrus clementina
Ciclev10009749m.g Citrus clementina
Ciclev10019645m.g Citrus clementina
CiPaw.03G264000 Carya illinoinensis
CiPaw.03G264100 Carya illinoinensis
CiPaw.04G186600 Carya illinoinensis
ClCG02G016050 Citrullus lanatus
ClCG05G004310 Citrullus lanatus
COL.COLO4_11468 Corchorus olitorius
COL.COLO4_15877 Corchorus olitorius
Cpa.g.sc165.11 Carica papaya
Cpa.g.sc44.58 Carica papaya
Cre03.g194000 Chlamydomonas reinhardtii
CsaV3_2G004930 Cucumis sativus L.
CsaV3_3G012090 Cucumis sativus L.
CSS0022338 Camellia sinensis var. sinensis
CSS0027280 Camellia sinensis var. sinensis
CSS0041145 Camellia sinensis var. sinensis
DCAR_007299 Daucus carota
DCAR_018482 Daucus carota
Dinv22408 Davidia involucrata
Dinv34624 Davidia involucrata
Dinv34625 Davidia involucrata
Duzib151G0731 Durio zibethinus
Duzib212G0548 Durio zibethinus
ECA232G4398 Erigeron canadensis
ECA233G2014 Erigeron canadensis
ECA247G2288 Erigeron canadensis
EL10Ac2g04501 Beta vulgaris
EL10Ac2g04687 Beta vulgaris
EL10Ac4g07698 Beta vulgaris
EL10Ac5g10400 Beta vulgaris
Eucgr.B01555 Eucalyptus grandis
Eucgr.B02550 Eucalyptus grandis
FAN08G0133 Fragaria x ananassa
FAN12G3702 Fragaria x ananassa
FAN13G3288 Fragaria x ananassa
FAN15G0951 Fragaria x ananassa
FAN17G0519 Fragaria x ananassa
FAN17G1904 Fragaria x ananassa
FAN18G3133 Fragaria x ananassa
FAN20G1607 Fragaria x ananassa
FAN22G0377 Fragaria x ananassa
FAN24G0740 Fragaria x ananassa
FAN27G1893 Fragaria x ananassa
FvH4_2g21480 Fragaria vesca
FvH4_4g03640 Fragaria vesca
FvH4_5g13320 Fragaria vesca
Glyma.07G134400 Glycine max
Glyma.18G183900 Glycine max
Glyma.19G164650 Glycine max
Gohir.A01G133100 Gossypium hirsutum
Gohir.A02G027803 Gossypium hirsutum
Gohir.A02G039500 Gossypium hirsutum
Gohir.A10G111100 Gossypium hirsutum
Gohir.D02G035925 Gossypium hirsutum
Gohir.D02G045600 Gossypium hirsutum
Gohir.D10G157000 Gossypium hirsutum
Gorai.002G143700 Gossypium raimondii
Gorai.005G050300 Gossypium raimondii
Gorai.011G174300 Gossypium raimondii
GSVIVG01027813001 Vitis vinifera
HanXRQChr03g0077721 Helianthus annuus
HanXRQChr05g0150911 Helianthus annuus
HanXRQChr09g0267641 Helianthus annuus
HanXRQChr09g0267651 Helianthus annuus
HanXRQChr14g0461431 Helianthus annuus
Haze_11380 Corylus avellana
Haze_24629 Corylus avellana
Haze_24630 Corylus avellana
Haze_26465 Corylus avellana
Hma1.2p1_2007F.1_g310930 Hydrangea macrophylla
HPP92_020821 Vanilla planifolia
Hund02915 Selenicereus undatus
Hund09602 Selenicereus undatus
Lalb_Chr01g0019661 Lupinus albus
Lalb_Chr01g0019691 Lupinus albus
Lalb_Chr25g0289971 Lupinus albus
Lj1g0017354 Lotus japonicus
Lj2C1151G12 Lonicera japonica
Lj2C624T4 Lonicera japonica
Lj5C794T2 Lonicera japonica
Lj5C794T6 Lonicera japonica
Lj5g0011136 Lotus japonicus
Lju99C4T1 Lonicera japonica
Lsat_1_v5_gn_1_120881 Lactuca sativa
Lsat_1_v5_gn_3_43301 Lactuca sativa
Lsat_1_v5_gn_4_125921 Lactuca sativa
Lsat_1_v5_gn_4_49140 Lactuca sativa
Manes.12G032300 Manihot esculenta
Manes.13G034000 Manihot esculenta
Mapoly0019s0005 Marchantia polymorpha
MBI07_g11178_MAGBIO Magnolia biondii
MBI07_g16243_MAGBIO Magnolia biondii
MBI07_g16244_MAGBIO Magnolia biondii
MBI07_g40650_MAGBIO Magnolia biondii
MBI18_g18529_MAGBIO Magnolia biondii
MCO12G172 Micromonas commoda
MD05G1197300 Malus domestica
MD10G1184000 Malus domestica
MD13G1214100 Malus domestica
MD16G1219100 Malus domestica
Medtr1g076120 Medicago truncatula
Medtr1g085510 Medicago truncatula
Medtr7g096940 Medicago truncatula
MELO3C004305.2 Cucumis melo
MELO3C006424.2 Cucumis melo
Migut.L00660 Erythranthe guttata
Migut.L00757 Erythranthe guttata
Migut.N02202 Erythranthe guttata
MSTRG.17490 Avicennia marina
Nitab4.5_0000470g0180 Nicotiana tabacum
Nitab4.5_0001855g0080 Nicotiana tabacum
Nitab4.5_0005993g0020 Nicotiana tabacum
Nitab4.5_0006658g0020 Nicotiana tabacum
Nn1g02761 Nelumbo nucifera
Nn1g06807 Nelumbo nucifera
Nn1g06809 Nelumbo nucifera
Nn1g06810 Nelumbo nucifera
Nn1g09221 Nelumbo nucifera
Oeu027307.1 Olea europaea
Oeu040987.2 Olea europaea
Os08g0127700 Oryza sativa ssp. japonica
Peaxi162Scf00013g01114 Petunia axillaris
Peaxi162Scf00855g00232 Petunia axillaris
PGR102G2193 Punica granatum
PGSC0003DMG400010324 Solanum tuberosum
PGSC0003DMG400020072 Solanum tuberosum
Phvul.006G069800 Phaseolus vulgaris
Potri.012G064100 Populus trichocarpa
Potri.015G048200 Populus trichocarpa
Pp3c19_14100 Physcomitrium patens
PRCOL_00004842 Prasinoderma coloniale
Prupe.1G039500 Prunus persica
Prupe.8G223800 Prunus persica
Psat0s1094g0160 Pisum sativum
Psat0s1094g0200 Pisum sativum
Psat6g054920 Pisum sativum
PSO210G5288 Papaver somniferum
PSO210G5828 Papaver somniferum
PSO210G6182 Papaver somniferum
PSO210G7316 Papaver somniferum
PSO676G0018 Papaver somniferum
PSO832G3759 Papaver somniferum
QL02p014536 Quercus lobata
QL04p001446 Quercus lobata
QL06p017953 Quercus lobata
QL06p018004 Quercus lobata
RcHm_v2.0_Chr4g0393021 Rosa chinensis
RcHm_v2.0_Chr6g0288131 Rosa chinensis
RcHm_v2.0_Chr7g0183821 Rosa chinensis
Rhsim01G0264000 Rhododendron simsii
Rhsim06G0149800 Rhododendron simsii
Sabra12G0045800 Salix brachista
SalBow6G6946 Salvia bowleyana
Sc17g0000650 Simmondsia chinensis
Sed0018413 Sechium edule
Sed0025164 Sechium edule
SEGI_01744 Sequoiadendron giganteum
SEGI_03606 Sequoiadendron giganteum
SGA_v2.0_scaffold510G52613 Striga asiatica
SGA_v2.0_scaffold80G25774 Striga asiatica
SMO147G0385 Selaginella moellendorffii
SMO367G0861 Selaginella moellendorffii
Solyc06g083890.4 Solanum lycopersicum
Solyc09g072570.3 Solanum lycopersicum
Sopen06g035290 Solanum pennellii
Sopen09g028380 Solanum pennellii
Sp5g18770 Schrenkiella parvula
Sp7g18290 Schrenkiella parvula
SpUn0003_0030 Schrenkiella parvula
SpUn0641_0020 Schrenkiella parvula
TAR365G0593 Trochodendron aralioides
TAR636G1082 Trochodendron aralioides
TAR636G3034 Trochodendron aralioides
THA.LOC104801152 Tarenaya hassleriana
Thecc.04G255300 Theobroma cacao
Thecc.09G105100 Theobroma cacao
Thhalv10007322m.g Eutrema salsugineum
Thhalv10022337m.g Eutrema salsugineum
Thhalv10024881m.g Eutrema salsugineum
Thhalv10027112m.g Eutrema salsugineum
TPR.G1474 Trifolium pratense
TPR.G4646 Trifolium pratense
TPR.G4754 Trifolium pratense
TWI12G0014 Tripterygium wilfordii
TWI18G0783 Tripterygium wilfordii
unitig_746.g26600 Utricularia gibba
unitig_899.g15390 Utricularia gibba
vmacro17031 Vaccinium macrocarpon
VMungo0720G1154 Vigna mungo
Zm00001eb173350 Zea mays
Zm00001eb261550 Zea mays

User provided reference genes

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