Gene: PGR102G2193

General Information

Structural Information

  • Species Punica granatum
  • Gene Identifier PGR102G2193
  • Transcript Identifier PGR102G2193.01
  • Gene Type Coding gene
  • Location NC_045129.1 : 3757372-3760715 : positive

Gene Family Information

  • ID HOM05D002351
  • #Genes/#Species 289/99
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • pid XP_031388725.1
  • name LOC116201584
  • name XM_031532865.1
  • id gene-LOC116201584
  • uniprot A0A6P8CX47

Descriptions

  • product pre-mRNA-splicing factor SLU7-like
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0000398
IEA
GOA DatabasemRNA splicing, via spliceosome
GO:0000398
IEA
InterPromRNA splicing, via spliceosome
GO:0006397
IEA
GOA DatabasemRNA processing
GO:0008380
IEA
GOA DatabaseRNA splicing
GO:0008284
ISO
PLAZA Integrative Orthologypositive regulation of cell population proliferation AT1G65660

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0000386
IEA
GOA Databasesecond spliceosomal transesterification activity
GO:0000386
IEA
InterProsecond spliceosomal transesterification activity
GO:0030628
IEA
GOA Databasepre-mRNA 3'-splice site binding
GO:0030628
IEA
InterPropre-mRNA 3'-splice site binding
GO:0003727
ISO
PLAZA Integrative Orthologysingle-stranded RNA binding AT1G65660

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005681
IEA
GOA Databasespliceosomal complex
GO:0005634
IEA
GOA Databasenucleus

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR039974 Pre-mRNA-splicing factor SLU7
IPR021715 Pre-mRNA-splicing factor SLU7 domain
Mapman id Description
16.2.6.9 RNA processing.pre-mRNA splicing.spliceosome-associated non-snRNP factor activities.splicing factor (SLU7)