Gene: PGSC0003DMG400020072

General Information

Structural Information

  • Species Solanum tuberosum
  • Gene Identifier PGSC0003DMG400020072
  • Transcript Identifier PGSC0003DMT400051686
  • Gene Type Coding gene
  • Location ST4.03ch06 : 58737512-58743100 : negative

Gene Family Information

  • ID HOM05D002351
  • #Genes/#Species 289/99
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • pacid 37453676
  • id PGSC0003DMG400020072.v4.03
  • uniprot M1BS21

Descriptions

  • Description Step II splicing factor slu7
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0000398
IEA
GOA DatabasemRNA splicing, via spliceosome
GO:0000398
IEA
InterPromRNA splicing, via spliceosome
GO:0006397
IEA
GOA DatabasemRNA processing
GO:0008380
IBA
IEA
GOA DatabaseRNA splicing
GO:0008284
ISO
PLAZA Integrative Orthologypositive regulation of cell population proliferation AT1G65660

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0000386
IEA
GOA Databasesecond spliceosomal transesterification activity
GO:0000386
IEA
InterProsecond spliceosomal transesterification activity
GO:0030628
IEA
GOA Databasepre-mRNA 3'-splice site binding
GO:0030628
IEA
InterPropre-mRNA 3'-splice site binding
GO:0003727
ISO
PLAZA Integrative Orthologysingle-stranded RNA binding AT1G65660

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005681
IBA
IEA
GOA Databasespliceosomal complex
GO:0005634
IEA
GOA Databasenucleus

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR021715 Pre-mRNA-splicing factor SLU7 domain
IPR039974 Pre-mRNA-splicing factor SLU7
Mapman id Description
16.2.6.9 RNA processing.pre-mRNA splicing.spliceosome-associated non-snRNP factor activities.splicing factor (SLU7)