Gene: Solyc09g072570.3

General Information

Structural Information

  • Species Solanum lycopersicum
  • Gene Identifier Solyc09g072570.3
  • Transcript Identifier Solyc09g072570.3.1
  • Gene Type Coding gene
  • Location SL4.0ch09 : 61248509-61254342 : negative

Gene Family Information

  • ID HOM05D002351
  • #Genes/#Species 289/99
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Solyc09g072570.3.1
  • uniprot A0A3Q7I625
  • gene_id Solyc09g072570

Descriptions

  • Description Pre-mRNA-splicing factor SLU7 (AHRD V3.3 *** A0A2G2WMV0_CAPBA)
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0000398
IEA
GOA DatabasemRNA splicing, via spliceosome
GO:0000398
IEA
InterPromRNA splicing, via spliceosome
GO:0006397
IEA
GOA DatabasemRNA processing
GO:0008380
IBA
IEA
GOA DatabaseRNA splicing
GO:0008284
ISO
PLAZA Integrative Orthologypositive regulation of cell population proliferation AT1G65660

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0000386
IEA
GOA Databasesecond spliceosomal transesterification activity
GO:0000386
IEA
InterProsecond spliceosomal transesterification activity
GO:0030628
IEA
GOA Databasepre-mRNA 3'-splice site binding
GO:0030628
IEA
InterPropre-mRNA 3'-splice site binding
GO:0003727
ISO
PLAZA Integrative Orthologysingle-stranded RNA binding AT1G65660

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005681
IBA
IEA
GOA Databasespliceosomal complex
GO:0005634
IEA
GOA Databasenucleus

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR021715 Pre-mRNA-splicing factor SLU7 domain
IPR039974 Pre-mRNA-splicing factor SLU7
Mapman id Description
16.2.6.9 RNA processing.pre-mRNA splicing.spliceosome-associated non-snRNP factor activities.splicing factor (SLU7)