Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A01p29840 Brassica napus
A02p32290 Brassica napus
A03p68910 Brassica napus
Aa31LG2G8170 Aethionema arabicum
Aa31LG2G9570 Aethionema arabicum
Aa31sc291G30 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_228.5774 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_344.448 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_344.449 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_344.452 Anthoceros agrestis
Actinidia06465 Actinidia chinensis
Actinidia12396 Actinidia chinensis
Actinidia26158 Actinidia chinensis
Actinidia36625 Actinidia chinensis
Ah.01g004900 Amaranthus hybridus
Ah.02g126190 Amaranthus hybridus
Ah.16g106690 Amaranthus hybridus
AL2G15430 Arabidopsis lyrata
AL5G10820 Arabidopsis lyrata
Aqoxy1G03746 Aquilegia oxysepala
Aqoxy3G02830 Aquilegia oxysepala
Aqoxy7G01151 Aquilegia oxysepala
Aqoxy7G01152 Aquilegia oxysepala
Aqoxy7G01153 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.0HZN60 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.97GRLX Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.DJZM3B Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.GST58F Arachis hypogaea
AT1G61010 Arabidopsis thaliana
AT2G01730 Arabidopsis thaliana
ATR0568G050 Amborella trichopoda
ATR0568G179 Amborella trichopoda
ATR0753G129 Amborella trichopoda
Atru.chr10.1555 Acer truncatum
Atru.chr10.1556 Acer truncatum
Atru.chr11.917 Acer truncatum
Atru.chr6.693 Acer truncatum
Atru.chr6.694 Acer truncatum
AUR62010473 Chenopodium quinoa
AUR62011671 Chenopodium quinoa
AUR62016494 Chenopodium quinoa
AUR62030423 Chenopodium quinoa
BcaB04g20308 Brassica carinata
BcaB07g30376 Brassica carinata
BcaC02g10597 Brassica carinata
BcaC03g17071 Brassica carinata
BcaC09g49340 Brassica carinata
BolC1t03733H Brassica oleracea
BolC2t11068H Brassica oleracea
BolC4t24247H Brassica oleracea
BolC4t24248H Brassica oleracea
BraA01t03112Z Brassica rapa
BraA02t08246Z Brassica rapa
BraSC39t46173Z Brassica rapa
C01p37690 Brassica napus
C02p49890 Brassica napus
C04p25610 Brassica napus
C04p25620 Brassica napus
C05p50840 Brassica napus
C05p50850 Brassica napus
CAN.G290.19 Capsicum annuum
CAN.G529.48 Capsicum annuum
CAN.G74.9 Capsicum annuum
CANSAT01G0386 Cannabis sativa
CANSAT11G0528 Cannabis sativa
CARHR052150 Cardamine hirsuta
CARHR144290 Cardamine hirsuta
Carub.0002s0418 Capsella rubella
Carub.0005s0067 Capsella rubella
Ca_00055_v3 Cicer arietinum L.
Ca_12538_v3 Cicer arietinum L.
Ca_12539_v3 Cicer arietinum L.
CBR_g20441 Chara braunii
CBR_g31441 Chara braunii
Cc02_g22840 Coffea canephora
Cc11_g07310 Coffea canephora
Cc11_g07370 Coffea canephora
CDE01G0324 Ceratophyllum demersum
CDE02G0889 Ceratophyllum demersum
CDE04G3481 Ceratophyllum demersum
CDE12G0623 Ceratophyllum demersum
Cfa023215 Carpinus fangiana
Cfa023216 Carpinus fangiana
Ciclev10000467m.g Citrus clementina
Ciclev10000468m.g Citrus clementina
Ciclev10014563m.g Citrus clementina
CiPaw.06G052200 Carya illinoinensis
CiPaw.06G144400 Carya illinoinensis
CiPaw.06G144600 Carya illinoinensis
CiPaw.06G144700 Carya illinoinensis
CiPaw.08G110700 Carya illinoinensis
ClCG09G016760 Citrullus lanatus
ClCG09G016770 Citrullus lanatus
ClCG11G013430 Citrullus lanatus
COL.COLO4_11757 Corchorus olitorius
COL.COLO4_16597 Corchorus olitorius
COL.COLO4_31913 Corchorus olitorius
COL.COLO4_31914 Corchorus olitorius
Cpa.g.sc118.41 Carica papaya
Cpa.g.sc2.191 Carica papaya
Cre02.g080100 Chlamydomonas reinhardtii
Cre12.g498050 Chlamydomonas reinhardtii
CsaV3_2G036200 Cucumis sativus L.
CsaV3_5G029960 Cucumis sativus L.
CsaV3_5G029980 Cucumis sativus L.
CSS0021671 Camellia sinensis var. sinensis
CSS0024108 Camellia sinensis var. sinensis
CSS0027933 Camellia sinensis var. sinensis
CSS0031775 Camellia sinensis var. sinensis
CSS0036640 Camellia sinensis var. sinensis
CSS0047146 Camellia sinensis var. sinensis
DCAR_006689 Daucus carota
DCAR_011517 Daucus carota
DCAR_026803 Daucus carota
Dinv01850 Davidia involucrata
Dinv07725 Davidia involucrata
Dinv07726 Davidia involucrata
Dinv10472 Davidia involucrata
Dinv10473 Davidia involucrata
Dinv24311 Davidia involucrata
Duzib052G0396 Durio zibethinus
Duzib132G0735 Durio zibethinus
Duzib251G0919 Durio zibethinus
ECA236G3872 Erigeron canadensis
ECA246G0076 Erigeron canadensis
ECA246G3445 Erigeron canadensis
EL10Ac4g08758 Beta vulgaris
EL10Ac9g22038 Beta vulgaris
Eucgr.G00400 Eucalyptus grandis
Eucgr.G00401 Eucalyptus grandis
Eucgr.G00404 Eucalyptus grandis
Eucgr.G02104 Eucalyptus grandis
FAN03G1556 Fragaria x ananassa
FAN04G1414 Fragaria x ananassa
FAN06G3093 Fragaria x ananassa
FAN06G3162 Fragaria x ananassa
FAN07G1867 Fragaria x ananassa
FAN07G2305 Fragaria x ananassa
FAN08G2113 Fragaria x ananassa
FAN12G2583 Fragaria x ananassa
FAN13G2793 Fragaria x ananassa
FAN17G1518 Fragaria x ananassa
FAN17G2388 Fragaria x ananassa
FAN22G0816 Fragaria x ananassa
FvH4_4g07000 Fragaria vesca
FvH4_4g33520 Fragaria vesca
FvH4_5g28761 Fragaria vesca
FvH4_5g28770 Fragaria vesca
FvH4_5g28771 Fragaria vesca
FvH4_7g26760 Fragaria vesca
FvH4_7g26770 Fragaria vesca
Glyma.02G085400 Glycine max
Glyma.08G188800 Glycine max
Glyma.12G168900 Glycine max
Gohir.A04G142900 Gossypium hirsutum
Gohir.A13G036300 Gossypium hirsutum
Gohir.D04G186200 Gossypium hirsutum
Gohir.D13G034600 Gossypium hirsutum
Gorai.012G182600 Gossypium raimondii
Gorai.013G039200 Gossypium raimondii
GSVIVG01011657001 Vitis vinifera
GSVIVG01023351001 Vitis vinifera
GSVIVG01023355001 Vitis vinifera
GSVIVG01023356001 Vitis vinifera
GSVIVG01023373001 Vitis vinifera
GSVIVG01023380001 Vitis vinifera
HanXRQChr17g0534331 Helianthus annuus
HanXRQChr17g0559661 Helianthus annuus
Haze_01808 Corylus avellana
Haze_01809 Corylus avellana
Haze_10877 Corylus avellana
Haze_26930 Corylus avellana
Haze_26947 Corylus avellana
Hma1.2p1_0277F.1_g111670 Hydrangea macrophylla
Hma1.2p1_2522F.1_g323860 Hydrangea macrophylla
Hma1.2p1_2522F.1_g323890 Hydrangea macrophylla
HPP92_015169 Vanilla planifolia
HPP92_024777 Vanilla planifolia
Hund02003 Selenicereus undatus
Hund02006 Selenicereus undatus
Hund02008 Selenicereus undatus
Hund02009 Selenicereus undatus
Hund02010 Selenicereus undatus
Hund06801 Selenicereus undatus
Hund15102 Selenicereus undatus
Hund24272 Selenicereus undatus
Lalb_Chr10g0095691 Lupinus albus
Lalb_Chr10g0095701 Lupinus albus
Lalb_Chr20g0123631 Lupinus albus
Lj1g0014242 Lotus japonicus
Lj2g0009645 Lotus japonicus
Lj5A255T82 Lonicera japonica
Lj5C255T12 Lonicera japonica
Lj5g0002389 Lotus japonicus
Lj6A737G48 Lonicera japonica
Lj6A737G49 Lonicera japonica
Lj6g0014440 Lotus japonicus
Lsat_1_v5_gn_3_53521 Lactuca sativa
Lsat_1_v5_gn_7_79181 Lactuca sativa
Manes.10G123600 Manihot esculenta
Manes.17G084001 Manihot esculenta
Mapoly0023s0072 Marchantia polymorpha
Mapoly0069s0028 Marchantia polymorpha
MBI04_g30788_MAGBIO Magnolia biondii
MBI04_g30789_MAGBIO Magnolia biondii
MBI19_g08381_MAGBIO Magnolia biondii
MBI19_g34072_MAGBIO Magnolia biondii
MCO04G421 Micromonas commoda
MD08G1237400 Malus domestica
MD15G1429300 Malus domestica
MD16G1018300 Malus domestica
Medtr1g032500 Medicago truncatula
Medtr2g006180 Medicago truncatula
Medtr2g015350 Medicago truncatula
MELO3C011841.2 Cucumis melo
MELO3C021825.2 Cucumis melo
MELO3C027046.2 Cucumis melo
MELO3C027241.2 Cucumis melo
Migut.B00809 Erythranthe guttata
Migut.F01878 Erythranthe guttata
MSTRG.20312 Avicennia marina
MSTRG.8103 Avicennia marina
Nitab4.5_0000667g0210 Nicotiana tabacum
Nitab4.5_0001678g0060 Nicotiana tabacum
Nitab4.5_0002414g0090 Nicotiana tabacum
Nitab4.5_0002803g0040 Nicotiana tabacum
Nitab4.5_0005079g0010 Nicotiana tabacum
Nitab4.5_0007277g0010 Nicotiana tabacum
Nitab4.5_0028330g0010 Nicotiana tabacum
Nn1g09279 Nelumbo nucifera
Nn4g24387 Nelumbo nucifera
Nn4g24388 Nelumbo nucifera
Nn4g24394 Nelumbo nucifera
Oeu023418.1 Olea europaea
Oeu034119.1 Olea europaea
Oeu062634.1 Olea europaea
Oeu062636.1 Olea europaea
Oeu062637.1 Olea europaea
Oeu064618.2 Olea europaea
Os03g0852900 Oryza sativa ssp. japonica
Os09g0397900 Oryza sativa ssp. japonica
Peaxi162Scf00003g03948 Petunia axillaris
Peaxi162Scf00337g00816 Petunia axillaris
PGR042G3798 Punica granatum
PGR142G4413 Punica granatum
PGSC0003DMG400000682 Solanum tuberosum
PGSC0003DMG400029468 Solanum tuberosum
Phvul.003G018200 Phaseolus vulgaris
Phvul.006G217100 Phaseolus vulgaris
Potri.010G106200 Populus trichocarpa
Potri.017G076000 Populus trichocarpa
Potri.017G076132 Populus trichocarpa
Potri.017G076300 Populus trichocarpa
Pp3c5_16690 Physcomitrium patens
Pp3c5_23920 Physcomitrium patens
Pp3c6_3520 Physcomitrium patens
PRCOL_00001441 Prasinoderma coloniale
Prupe.1G333600 Prunus persica
Prupe.1G574800 Prunus persica
Prupe.1G574900 Prunus persica
Prupe.I006100 Prunus persica
Prupe.I006200 Prunus persica
Psat3g090080 Pisum sativum
Psat3g190360 Pisum sativum
Psat6g046600 Pisum sativum
PSO017G4060 Papaver somniferum
PSO063G5226 Papaver somniferum
QL02p098463 Quercus lobata
QL02p099792 Quercus lobata
RcHm_v2.0_Chr1g0363271 Rosa chinensis
RcHm_v2.0_Chr2g0101461 Rosa chinensis
RcHm_v2.0_Chr3g0480131 Rosa chinensis
RcHm_v2.0_Chr4g0399131 Rosa chinensis
RcHm_v2.0_Chr4g0443031 Rosa chinensis
RcHm_v2.0_Chr6g0263901 Rosa chinensis
RcHm_v2.0_Chr7g0220981 Rosa chinensis
Rhsim09G0089400 Rhododendron simsii
Rhsim10G0102700 Rhododendron simsii
Rhsim10G0102800 Rhododendron simsii
Sabra10G0077600 Salix brachista
Sabra17G0068000 Salix brachista
Sabra17G0068100 Salix brachista
Sc04g0007240 Simmondsia chinensis
Sc04g0007250 Simmondsia chinensis
Sc14g0007300 Simmondsia chinensis
Sed0002570 Sechium edule
Sed0012035 Sechium edule
SEGI_00225 Sequoiadendron giganteum
SEGI_01715 Sequoiadendron giganteum
SEGI_18225 Sequoiadendron giganteum
SEGI_19065 Sequoiadendron giganteum
SEGI_21233 Sequoiadendron giganteum
SEGI_22125 Sequoiadendron giganteum
SEGI_30549 Sequoiadendron giganteum
SEGI_38909 Sequoiadendron giganteum
SEGI_40984 Sequoiadendron giganteum
SGA_v2.0_scaffold92G28301 Striga asiatica
SHI04310 Sapria himalayana
SHI08868 Sapria himalayana
SMO139G0046 Selaginella moellendorffii
SMO270G0079 Selaginella moellendorffii
SMO306G0001 Selaginella moellendorffii
Solyc04g008030.2 Solanum lycopersicum
Solyc07g049480.3 Solanum lycopersicum
Sopen04g003170 Solanum pennellii
Sopen07g024830 Solanum pennellii
Sp2g03500 Schrenkiella parvula
Sp2g13180 Schrenkiella parvula
TAR374G1090 Trochodendron aralioides
TAR629G1401 Trochodendron aralioides
TAR629G1852 Trochodendron aralioides
THA.LOC104805082 Tarenaya hassleriana
THA.LOC104819173 Tarenaya hassleriana
Thecc.02G090300 Theobroma cacao
Thecc.02G293000 Theobroma cacao
Thhalv10005303m.g Eutrema salsugineum
Thhalv10024010m.g Eutrema salsugineum
TPR.G35593 Trifolium pratense
TPR.G36871 Trifolium pratense
TWI14G0623 Tripterygium wilfordii
TWI74G1639 Tripterygium wilfordii
unitig_22.g6110 Utricularia gibba
unitig_46.g18398 Utricularia gibba
vmacro10695 Vaccinium macrocarpon
vmacro19877 Vaccinium macrocarpon
vmacro19878 Vaccinium macrocarpon
VMungo0540G2019 Vigna mungo
VMungo0720G0546 Vigna mungo
Zm00001eb064770 Zea mays
Zm00001eb159740 Zea mays
Zm00001eb210600 Zea mays

User provided reference genes

Program Settings