Gene: Sopen04g003170

General Information

Structural Information

  • Species Solanum pennellii
  • Gene Identifier Sopen04g003170
  • Transcript Identifier Sopen04g003170.1
  • Gene Type Coding gene
  • Location Spenn-ch04 : 1821859-1836665 : negative

Gene Family Information

  • ID HOM05D002001
  • #Genes/#Species 331/99
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Sopen04g003170.1

Descriptions

  • Description a homolog of cleavage and polyadenylation specificity factor that plays an essential role in the development of female gametophyte and embryo | cleavage and polyadenylation specificity factor 73 kDa subunit-II (CPSF73-II) | CONTAINS InterPro DOMAIN/s: RNA-metabolising metallo-beta-lactamase , Beta-Casp domain , Beta-lactamase-like | BEST Arabidopsis thaliana protein match is: cleavage and polyadenylation specificity factor 73-I
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Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0010197
ISO
PLAZA Integrative Orthologypolar nucleus fusion AT2G01730

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005515
ISO
PLAZA Integrative Orthologyprotein binding AT2G01730

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
ISO
PLAZA Integrative Orthologynucleus AT2G01730

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
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InterPro Description
IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like
IPR001279 Metallo-beta-lactamase
IPR011108 Zn-dependent metallo-hydrolase, RNA specificity domain
IPR022712 Beta-Casp domain
IPR041897 Integrator complex subunit 11, MBL-fold
Mapman id Description
16.3.1.2.4 RNA processing.RNA 3'-end processing.mRNA polyadenylation.Cleavage and Polyadenylation Specificity Factor (CPSF) complex.nuclease component CPSF73-II