Gene: Ah.01g004900
General Information
Structural Information
- Species Amaranthus hybridus
- Gene Identifier Ah.01g004900
- Transcript Identifier Ah.01g004900-v1.1.a1
- Gene Type Coding gene
- Location AmaHy_arrow1_Scaffold_1 : 4124890-4136125 : positive
Gene Family Information
- ID HOM05D002001
- #Genes/#Species 331/99
- Phylogenetic origin
- ID ORTHO05D004100
- #Genes/#Species 191/100
- Phylogenetic origin
Gene Duplication Information
Labels
Identifiers
- tid Ah.01g004900-v1.1.a1
Descriptions
- Description Cleavage and polyadenylation specificity factor subunit 3-I (EC 3.1.27.-) (Cleavage and polyadenylation specificity factor 73 kDa subunit I) (AtCPSF73-I) (CPSF 73 kDa subunit I)
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0016180 | ISO | PLAZA Integrative Orthology | snRNA processing | AT1G61010 |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005515 | ISO | PLAZA Integrative Orthology | protein binding | AT1G61010 |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005634 | ISO | PLAZA Integrative Orthology | nucleus | AT1G61010 |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| InterPro | Description |
|---|---|
| IPR011108 | Zn-dependent metallo-hydrolase, RNA specificity domain |
| IPR022712 | Beta-Casp domain |
| IPR036866 | Ribonuclease Z/Hydroxyacylglutathione hydrolase-like |
| IPR001279 | Metallo-beta-lactamase |
| IPR027417 | P-loop containing nucleoside triphosphate hydrolase |
| IPR021718 | Pre-mRNA 3'-end-processing endonuclease polyadenylation factor C-term |
| Mapman id | Description |
|---|---|
| 16.3.1.2.3 | RNA processing.RNA 3'-end processing.mRNA polyadenylation.Cleavage and Polyadenylation Specificity Factor (CPSF) complex.nuclease component CPSF73-I |
| 16.3.2.1.5 | RNA processing.RNA 3'-end processing.snRNA maturation.DSP snRNA processing complex.nuclease component CPSF73-I |