Gene: HPP92_015169

General Information

Structural Information

  • Species Vanilla planifolia
  • Gene Identifier HPP92_015169
  • Transcript Identifier Vpl07Ag15169.1
  • Gene Type Coding gene
  • Location CM028156.1 : 22400629-22411965 : negative

Gene Family Information

  • ID HOM05D002001
  • #Genes/#Species 331/99
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Vpl07Ag15169.1
  • pid KAG0473312.1

Descriptions

  • Description Cleavage and polyadenylation specificity factor subunit 3 ***
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0016180
ISO
PLAZA Integrative OrthologysnRNA processing AT1G61010

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005515
ISO
PLAZA Integrative Orthologyprotein binding AT1G61010

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
ISO
PLAZA Integrative Orthologynucleus AT1G61010

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR021718 Pre-mRNA 3'-end-processing endonuclease polyadenylation factor C-term
IPR011108 Zn-dependent metallo-hydrolase, RNA specificity domain
IPR001279 Metallo-beta-lactamase
IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like
IPR022712 Beta-Casp domain
Mapman id Description
16.3.1.2.3 RNA processing.RNA 3'-end processing.mRNA polyadenylation.Cleavage and Polyadenylation Specificity Factor (CPSF) complex.nuclease component CPSF73-I
16.3.2.1.5 RNA processing.RNA 3'-end processing.snRNA maturation.DSP snRNA processing complex.nuclease component CPSF73-I