Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A03p41340 Brassica napus
A05p06770 Brassica napus
A08p09350 Brassica napus
A09p17620 Brassica napus
Aa31LG1G15680 Aethionema arabicum
Aa31LG2G10090 Aethionema arabicum
Aa31LG5G19980 Aethionema arabicum
Aa31LG8G6410 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_228.3216 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_340.471 Anthoceros agrestis
Actinidia02943 Actinidia chinensis
Actinidia08166 Actinidia chinensis
Actinidia34362 Actinidia chinensis
Ah.03g132670 Amaranthus hybridus
Ah.14g085660 Amaranthus hybridus
Ah.16g102360 Amaranthus hybridus
AL1G57620 Arabidopsis lyrata
AL2G16430 Arabidopsis lyrata
AL3G33070 Arabidopsis lyrata
AL4G37080 Arabidopsis lyrata
Aqoxy2G02149 Aquilegia oxysepala
Aqoxy3G01006 Aquilegia oxysepala
Aqoxy5G00876 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.30T4YV Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.CT1PYC Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.DKQ9MY Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.EV0K0L Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.I0S28J Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.W4JRHW Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.WUGE08 Arachis hypogaea
AT1G60230 Arabidopsis thaliana
AT2G39670 Arabidopsis thaliana
AT3G19630 Arabidopsis thaliana
ATR0559G015 Amborella trichopoda
ATR0730G221 Amborella trichopoda
ATR1153G087 Amborella trichopoda
Atru.chr11.2017 Acer truncatum
Atru.chr12.441 Acer truncatum
Atru.chr12.442 Acer truncatum
Atru.chr5.2358 Acer truncatum
AUR62005375 Chenopodium quinoa
AUR62012094 Chenopodium quinoa
AUR62014037 Chenopodium quinoa
AUR62032992 Chenopodium quinoa
AUR62034082 Chenopodium quinoa
AUR62039372 Chenopodium quinoa
BcaB02g09098 Brassica carinata
BcaB04g19055 Brassica carinata
BcaB06g29113 Brassica carinata
BcaB07g31206 Brassica carinata
BcaC01g03613 Brassica carinata
BcaC02g12095 Brassica carinata
BcaC04g22221 Brassica carinata
BcaC05g27325 Brassica carinata
BcaC06g36679 Brassica carinata
BolC3t17340H Brassica oleracea
BolC4t22409H Brassica oleracea
BolC9t55100H Brassica oleracea
BraA03t13288Z Brassica rapa
BraA05t19644Z Brassica rapa
BraA09t37392Z Brassica rapa
C03p50500 Brassica napus
C04p07920 Brassica napus
C04p67460 Brassica napus
C05p50050 Brassica napus
C09p21950 Brassica napus
C09p24350 Brassica napus
CAN.G130.9 Capsicum annuum
CAN.G376.6 Capsicum annuum
CAN.G606.57 Capsicum annuum
CANSAT01G1716 Cannabis sativa
CANSAT25G2505 Cannabis sativa
CANSAT56G1570 Cannabis sativa
CANSAT56G2080 Cannabis sativa
CARHR052730 Cardamine hirsuta
CARHR095090 Cardamine hirsuta
CARHR134510 Cardamine hirsuta
Carub.0002s0502 Capsella rubella
Carub.0003s1950 Capsella rubella
Carub.0004s2171 Capsella rubella
Ca_05895_v3 Cicer arietinum L.
Ca_22725_v3 Cicer arietinum L.
Ca_22727_v3 Cicer arietinum L.
Ca_24358_v3 Cicer arietinum L.
CBR_g41638 Chara braunii
CBR_g8391 Chara braunii
Cc00_g18300 Coffea canephora
Cc02_g07790 Coffea canephora
Cc02_g19830 Coffea canephora
Cc11_g14650 Coffea canephora
CDE04G3735 Ceratophyllum demersum
CDE05G1394 Ceratophyllum demersum
CDE05G1870 Ceratophyllum demersum
CDE05G3484 Ceratophyllum demersum
Cfa001469 Carpinus fangiana
Cfa004629 Carpinus fangiana
Cfa009141 Carpinus fangiana
Ciclev10028673m.g Citrus clementina
Ciclev10031376m.g Citrus clementina
Ciclev10031999m.g Citrus clementina
CiPaw.01G288000 Carya illinoinensis
CiPaw.05G017600 Carya illinoinensis
CiPaw.06G072300 Carya illinoinensis
ClCG02G006820 Citrullus lanatus
ClCG07G003250 Citrullus lanatus
ClCG08G018080 Citrullus lanatus
COL.COLO4_15056 Corchorus olitorius
COL.COLO4_32517 Corchorus olitorius
COL.COLO4_36967 Corchorus olitorius
Cpa.g.sc1.412 Carica papaya
Cpa.g.sc106.52 Carica papaya
Cpa.g.sc69.29 Carica papaya
Cre01.g028450 Chlamydomonas reinhardtii
Cre01.g043000 Chlamydomonas reinhardtii
Cre02.g086550 Chlamydomonas reinhardtii
Cre02.g109250 Chlamydomonas reinhardtii
Cre05.g238500 Chlamydomonas reinhardtii
CsaV3_4G037870 Cucumis sativus L.
CsaV3_5G008000 Cucumis sativus L.
CsaV3_7G007820 Cucumis sativus L.
CSS0013957 Camellia sinensis var. sinensis
CSS0018439 Camellia sinensis var. sinensis
CSS0026041 Camellia sinensis var. sinensis
CSS0031263 Camellia sinensis var. sinensis
CSS0038205 Camellia sinensis var. sinensis
CSS0045963 Camellia sinensis var. sinensis
DCAR_001697 Daucus carota
DCAR_005051 Daucus carota
DCAR_031101 Daucus carota
Dinv15804 Davidia involucrata
Dinv24861 Davidia involucrata
Dinv26021 Davidia involucrata
Duzib114G0935 Durio zibethinus
Duzib132G0579 Durio zibethinus
Duzib268G1537 Durio zibethinus
ECA232G4841 Erigeron canadensis
ECA234G2022 Erigeron canadensis
ECA236G5137 Erigeron canadensis
EL10Ac2g04741 Beta vulgaris
EL10Ac8g19389 Beta vulgaris
EL10Ac8g19390 Beta vulgaris
Eucgr.B03346 Eucalyptus grandis
Eucgr.I01063 Eucalyptus grandis
Eucgr.J00005 Eucalyptus grandis
FAN01G0725 Fragaria x ananassa
FAN01G1957 Fragaria x ananassa
FAN03G0055 Fragaria x ananassa
FAN03G1719 Fragaria x ananassa
FAN06G0650 Fragaria x ananassa
FAN06G2139 Fragaria x ananassa
FAN07G1170 Fragaria x ananassa
FAN10G1208 Fragaria x ananassa
FAN12G4310 Fragaria x ananassa
FAN15G0793 Fragaria x ananassa
FAN17G0819 Fragaria x ananassa
FAN20G1654 Fragaria x ananassa
FAN22G2343 Fragaria x ananassa
FAN24G2126 Fragaria x ananassa
FAN24G2863 Fragaria x ananassa
FAN27G0426 Fragaria x ananassa
FvH4_2g04300 Fragaria vesca
FvH4_4g34530 Fragaria vesca
FvH4_7g22600 Fragaria vesca
Glyma.01G242600 Glycine max
Glyma.02G247700 Glycine max
Glyma.08G287600 Glycine max
Glyma.11G001700 Glycine max
Glyma.14G068600 Glycine max
Gohir.A03G182600 Gossypium hirsutum
Gohir.A05G301700 Gossypium hirsutum
Gohir.A12G142700 Gossypium hirsutum
Gohir.D02G204200 Gossypium hirsutum
Gohir.D05G301400 Gossypium hirsutum
Gohir.D12G147500 Gossypium hirsutum
Gorai.005G231500 Gossypium raimondii
Gorai.008G158700 Gossypium raimondii
Gorai.009G319500 Gossypium raimondii
GSVIVG01007579001 Vitis vinifera
GSVIVG01016561001 Vitis vinifera
GSVIVG01020239001 Vitis vinifera
GSVIVG01037840001 Vitis vinifera
HanXRQChr02g0049161 Helianthus annuus
HanXRQChr12g0383481 Helianthus annuus
HanXRQChr16g0509301 Helianthus annuus
Haze_10224 Corylus avellana
Haze_12175 Corylus avellana
Haze_17073 Corylus avellana
Haze_27405 Corylus avellana
Hma1.2p1_0953F.1_g241120 Hydrangea macrophylla
Hma1.2p1_1059F.1_g252950 Hydrangea macrophylla
HPP92_009540 Vanilla planifolia
HPP92_021345 Vanilla planifolia
HPP92_026926 Vanilla planifolia
Hund12567 Selenicereus undatus
Hund13767 Selenicereus undatus
Hund25345 Selenicereus undatus
Lalb_Chr04g0251261 Lupinus albus
Lalb_Chr05g0228161 Lupinus albus
Lalb_Chr09g0319611 Lupinus albus
Lalb_Chr10g0104531 Lupinus albus
Lj1g0020489 Lotus japonicus
Lj3C1052T11 Lonicera japonica
Lj4g0006314 Lotus japonicus
Lj8A83T63 Lonicera japonica
Lj9A327T33 Lonicera japonica
LjContig00141g0020777 Lotus japonicus
Lsat_1_v5_gn_0_39381 Lactuca sativa
Lsat_1_v5_gn_4_5880 Lactuca sativa
Lsat_1_v5_gn_7_85141 Lactuca sativa
Lsat_1_v5_gn_9_66060 Lactuca sativa
Manes.10G029700 Manihot esculenta
Manes.10G081800 Manihot esculenta
Manes.12G029233 Manihot esculenta
Mapoly0003s0260 Marchantia polymorpha
Mapoly0003s0274 Marchantia polymorpha
Mapoly0005s0156 Marchantia polymorpha
MBI05_g22025_MAGBIO Magnolia biondii
MBI16_g01206_MAGBIO Magnolia biondii
MBI16_g26452_MAGBIO Magnolia biondii
MCO03G412 Micromonas commoda
MCO05G433 Micromonas commoda
MCO09G613 Micromonas commoda
MCO15G562 Micromonas commoda
MD05G1099600 Malus domestica
MD05G1099700 Malus domestica
MD06G1051400 Malus domestica
MD07G1012700 Malus domestica
MD07G1199600 Malus domestica
MD10G1105300 Malus domestica
MD16G1092200 Malus domestica
Medtr5g005050 Medicago truncatula
Medtr5g079860 Medicago truncatula
Medtr8g064490 Medicago truncatula
MELO3C017082.2 Cucumis melo
MELO3C018520.2 Cucumis melo
MELO3C023846.2 Cucumis melo
Migut.B00447 Erythranthe guttata
Migut.F00783 Erythranthe guttata
Migut.L01411 Erythranthe guttata
MSTRG.20220 Avicennia marina
MSTRG.8997 Avicennia marina
Nitab4.5_0000065g0020 Nicotiana tabacum
Nitab4.5_0000113g0310 Nicotiana tabacum
Nitab4.5_0001105g0040 Nicotiana tabacum
Nitab4.5_0001719g0010 Nicotiana tabacum
Nitab4.5_0002494g0050 Nicotiana tabacum
Nitab4.5_0004308g0070 Nicotiana tabacum
Nitab4.5_0008075g0010 Nicotiana tabacum
Nitab4.5_0015019g0020 Nicotiana tabacum
Nn2g13352 Nelumbo nucifera
Nn4g22802 Nelumbo nucifera
Nn5g30572 Nelumbo nucifera
Oeu037281.1 Olea europaea
Oeu056396.1 Olea europaea
Oeu064373.1 Olea europaea
Os01g0640800 Oryza sativa ssp. japonica
Os01g0973400 Oryza sativa ssp. japonica
Os03g0202300 Oryza sativa ssp. japonica
Peaxi162Scf00016g02843 Petunia axillaris
Peaxi162Scf00338g00228 Petunia axillaris
Peaxi162Scf00658g00730 Petunia axillaris
PGR031G2413 Punica granatum
PGR044G0426 Punica granatum
PGR102G2178 Punica granatum
PGSC0003DMG400025840 Solanum tuberosum
PGSC0003DMG400030992 Solanum tuberosum
Phvul.002G051800 Phaseolus vulgaris
Phvul.003G052100 Phaseolus vulgaris
Phvul.008G233300 Phaseolus vulgaris
Potri.001G294900 Populus trichocarpa
Potri.008G056500 Populus trichocarpa
Potri.010G040700 Populus trichocarpa
Potri.010G203300 Populus trichocarpa
Pp3c13_1500 Physcomitrium patens
Pp3c16_19180 Physcomitrium patens
Pp3c5_4340 Physcomitrium patens
Pp3c6_16060 Physcomitrium patens
PRCOL_00002417 Prasinoderma coloniale
PRCOL_00003727 Prasinoderma coloniale
PRCOL_00004724 Prasinoderma coloniale
Prupe.1G254200 Prunus persica
Prupe.2G236300 Prunus persica
Prupe.8G144200 Prunus persica
Psat2g041640 Pisum sativum
Psat4g125320 Pisum sativum
Psat4g227560 Pisum sativum
PSO017G3957 Papaver somniferum
PSO017G6860 Papaver somniferum
PSO151G0085 Papaver somniferum
PSO339G2556 Papaver somniferum
PSO478G2278 Papaver somniferum
QL03p061251 Quercus lobata
QL08p059654 Quercus lobata
QL11p030649 Quercus lobata
RcHm_v2.0_Chr1g0367701 Rosa chinensis
RcHm_v2.0_Chr4g0443901 Rosa chinensis
RcHm_v2.0_Chr6g0253741 Rosa chinensis
Rhsim03G0130200 Rhododendron simsii
Rhsim11G0151200 Rhododendron simsii
Rhsim11G0153000 Rhododendron simsii
Rhsim12G0047100 Rhododendron simsii
RhsimUnG0091100 Rhododendron simsii
Sabra08G0041100 Salix brachista
Sabra10G0026400 Salix brachista
Sabra10G0156800 Salix brachista
Sabra16G0184000 Salix brachista
SalBow2G2445 Salvia bowleyana
SalBow4G0472 Salvia bowleyana
SalBow6G1197 Salvia bowleyana
Sc12g0006760 Simmondsia chinensis
Sc14g0004680 Simmondsia chinensis
Sc14g0008630 Simmondsia chinensis
Sed0004749 Sechium edule
Sed0011640 Sechium edule
Sed0013284 Sechium edule
SEGI_11841 Sequoiadendron giganteum
SEGI_25830 Sequoiadendron giganteum
SEGI_26043 Sequoiadendron giganteum
SEGI_27628 Sequoiadendron giganteum
SGA_v2.0_scaffold32G12995 Striga asiatica
SGA_v2.0_scaffold355G49768 Striga asiatica
SGA_v2.0_scaffold426G51503 Striga asiatica
SGA_v2.0_scaffold8G04225 Striga asiatica
SHI28787 Sapria himalayana
SMO266G0039 Selaginella moellendorffii
SMO347G0403 Selaginella moellendorffii
Solyc01g107040.3 Solanum lycopersicum
Solyc02g044020.3 Solanum lycopersicum
Solyc05g005590.4 Solanum lycopersicum
Solyc06g030570.3 Solanum lycopersicum
Sopen01g049310 Solanum pennellii
Sopen05g001600 Solanum pennellii
Sopen06g009920 Solanum pennellii
Sp2g04450 Schrenkiella parvula
Sp3g17670 Schrenkiella parvula
Sp4g21930 Schrenkiella parvula
SpUn0106_0020 Schrenkiella parvula
TAR374G0920 Trochodendron aralioides
TAR374G1145 Trochodendron aralioides
TAR376G0701 Trochodendron aralioides
TAR633G0218 Trochodendron aralioides
THA.LOC104809600 Tarenaya hassleriana
THA.LOC104810032 Tarenaya hassleriana
THA.LOC104824278 Tarenaya hassleriana
THA.LOC104825385 Tarenaya hassleriana
Thecc.02G116700 Theobroma cacao
Thecc.02G248400 Theobroma cacao
Thecc.10G040800 Theobroma cacao
Thhalv10016689m.g Eutrema salsugineum
Thhalv10020962m.g Eutrema salsugineum
Thhalv10023456m.g Eutrema salsugineum
TPR.G10779 Trifolium pratense
TPR.G32115 Trifolium pratense
TPR.G3478 Trifolium pratense
TPR.G8332 Trifolium pratense
TWI14G0581 Tripterygium wilfordii
TWI36G1303 Tripterygium wilfordii
TWI63G1737 Tripterygium wilfordii
unitig_0.g884 Utricularia gibba
unitig_749.g13270 Utricularia gibba
unitig_749.g13272 Utricularia gibba
vmacro01181 Vaccinium macrocarpon
vmacro01964 Vaccinium macrocarpon
vmacro07175 Vaccinium macrocarpon
VMungo0251G2401 Vigna mungo
VMungo0464G0092 Vigna mungo
VMungo0647G1743 Vigna mungo
VMungo1215G0697 Vigna mungo
Zm00001eb007700 Zea mays
Zm00001eb126750 Zea mays
Zm00001eb138990 Zea mays
Zm00001eb139000 Zea mays
Zm00001eb179610 Zea mays
Zm00001eb359210 Zea mays
Zm00001eb362190 Zea mays
Zm00001eb400870 Zea mays

User provided reference genes

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