Gene: Cc00_g18300
General Information
Structural Information
- Species Coffea canephora
- Gene Identifier Cc00_g18300
- Transcript Identifier Cc00_g18300.1
- Gene Type Coding gene
- Location chr0 : 119666253-119666417 : negative
Gene Family Information
- ID HOM05D001719
- #Genes/#Species 376/100
- Phylogenetic origin
- ID ORTHO05D007646
- #Genes/#Species 128/97
- Phylogenetic origin
Gene Duplication Information
Labels
Identifiers
- id GSCOCG00003090001
Descriptions
- Description Radical SAM superfamily protein
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0070475 | ISO | PLAZA Homology (enrichment) | rRNA base methylation | HOM05D001719 |
| GO:0006364 | ISO | PLAZA Homology (enrichment) | rRNA processing | HOM05D001719 |
| GO:0030488 | ISO | PLAZA Homology (enrichment) | tRNA methylation | HOM05D001719 |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0003824 | IEA | InterPro | catalytic activity | |
| GO:0008173 | ISO | PLAZA Homology (enrichment) | RNA methyltransferase activity | HOM05D001719 |
| GO:0051536 | ISO | PLAZA Homology (enrichment) | iron-sulfur cluster binding | HOM05D001719 |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| InterPro | Description |
|---|---|
| IPR013785 | Aldolase-type TIM barrel |
| Mapman id | Description |
|---|---|
| 35.2 | not assigned.not annotate |