Gene: FAN01G0725
General Information
Structural Information
- Species Fragaria x ananassa
- Gene Identifier FAN01G0725
- Transcript Identifier FAN01G0725.1
- Gene Type Coding gene
- Location Fvb7-4 : 5720174-5727828 : negative
Gene Family Information
- ID HOM05D001719
- #Genes/#Species 376/100
- Phylogenetic origin
- ID ORTHO05D007646
- #Genes/#Species 128/97
- Phylogenetic origin
Gene Duplication Information
- Block Duplication Block duplicate
Labels
Identifiers
- id maker-Fvb7-4-augustus-gene-57.48.v1.0.a1
- pacid 50542305
Descriptions
- Description K06941 - 23S rRNA (adenine2503-C2)-methyltransferase [EC:2.1.1.192] (rlmN)
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0030488 | IEA | InterPro | tRNA methylation | |
| GO:0070475 | IEA | InterPro | rRNA base methylation | |
| GO:0006364 | IEA | InterPro | rRNA processing |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0003676 | IEA | InterPro | nucleic acid binding | |
| GO:0003824 | IEA | InterPro | catalytic activity | |
| GO:0051536 | IEA | InterPro | iron-sulfur cluster binding | |
| GO:0008173 | IEA | InterPro | RNA methyltransferase activity |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| InterPro | Description |
|---|---|
| IPR000504 | RNA recognition motif domain |
| IPR013785 | Aldolase-type TIM barrel |
| IPR035979 | RNA-binding domain superfamily |
| IPR007197 | Radical SAM |
| IPR027492 | Dual-specificity RNA methyltransferase RlmN |
| IPR004383 | Ribosomal RNA large subunit methyltransferase RlmN/Cfr |
| IPR040072 | Methyltransferase (Class A) |
| IPR012677 | Nucleotide-binding alpha-beta plait domain superfamily |
| Mapman id | Description |
|---|---|
| 16.2.6.2 | RNA processing.pre-mRNA splicing.spliceosome-associated non-snRNP factor activities.splicing factor (SCL28/30/33) |