Gene: Pp3c6_16060

General Information

Structural Information

  • Species Physcomitrium patens
  • Gene Identifier Pp3c6_16060
  • Transcript Identifier Pp3c6_16060V3.1
  • Gene Type Coding gene
  • Location Chr06 : 10281904-10286493 : positive

Gene Family Information

  • ID HOM05D001719
  • #Genes/#Species 376/100
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • name Pp3c6_16060V3.1
  • pacid 32978325
  • alias Pp1s307_72V6
  • alias Phpat.006G057400
  • alias Phypa_149959
  • uniprot A9TSQ2

Descriptions

  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0030488
IEA
GOA DatabasetRNA methylation
GO:0030488
IEA
InterProtRNA methylation
GO:0070475
IEA
GOA DatabaserRNA base methylation
GO:0070475
IEA
InterProrRNA base methylation
GO:0032259
IEA
GOA Databasemethylation
GO:0006364
IEA
GOA DatabaserRNA processing
GO:0006364
IEA
InterProrRNA processing

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0051536
IEA
GOA Databaseiron-sulfur cluster binding
GO:0051536
IEA
InterProiron-sulfur cluster binding
GO:0008173
IEA
GOA DatabaseRNA methyltransferase activity
GO:0008173
IEA
InterProRNA methyltransferase activity
GO:0003824
IEA
GOA Databasecatalytic activity
GO:0003824
IEA
InterProcatalytic activity
GO:0008168
IEA
GOA Databasemethyltransferase activity
GO:0016740
IEA
GOA Databasetransferase activity
GO:0046872
IEA
GOA Databasemetal ion binding
GO:0051539
IEA
GOA Database4 iron, 4 sulfur cluster binding

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005737
IEA
GOA Databasecytoplasm

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR013785 Aldolase-type TIM barrel
IPR027492 Dual-specificity RNA methyltransferase RlmN
IPR007197 Radical SAM
IPR040072 Methyltransferase (Class A)
IPR004383 Ribosomal RNA large subunit methyltransferase RlmN/Cfr
Mapman id Description
35.1 not assigned.annotated