Gene: ATR1153G087

General Information

Structural Information

  • Species Amborella trichopoda
  • Gene Identifier ATR1153G087
  • Transcript Identifier ATR1153G087.1
  • Gene Type Coding gene
  • Location AmTr_v1.0_scaffold00086 : 124345-136853 : positive

Gene Family Information

  • ID HOM05D001719
  • #Genes/#Species 376/100
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • id evm_27.TU.AmTr_v1.0_scaffold00086.7.v1.0
  • pacid 31571484

Descriptions

  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006364
IEA
InterProrRNA processing
GO:0070475
ISO
PLAZA Homology (enrichment)rRNA base methylation HOM05D001719
GO:0030488
ISO
PLAZA Homology (enrichment)tRNA methylation HOM05D001719

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0008173
IEA
InterProRNA methyltransferase activity
GO:0003824
IEA
InterProcatalytic activity
GO:0051536
IEA
InterProiron-sulfur cluster binding

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR004383 Ribosomal RNA large subunit methyltransferase RlmN/Cfr
IPR007197 Radical SAM
IPR040072 Methyltransferase (Class A)
IPR013785 Aldolase-type TIM barrel
Mapman id Description
35.1 not assigned.annotated