Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A02p25240 Brassica napus
A04p28010 Brassica napus
A07p33450 Brassica napus
A09p26040 Brassica napus
Aa31LG10G8770 Aethionema arabicum
Aa31LG2G3140 Aethionema arabicum
Aa31LG5G21670 Aethionema arabicum
Aa31LG9G9610 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_228.3569 Anthoceros agrestis
Actinidia05528 Actinidia chinensis
Actinidia10402 Actinidia chinensis
Actinidia26938 Actinidia chinensis
Actinidia26939 Actinidia chinensis
Actinidia31289 Actinidia chinensis
Actinidia32456 Actinidia chinensis
Ah.09g235170 Amaranthus hybridus
Ah.09g235190 Amaranthus hybridus
Ah.13g066720 Amaranthus hybridus
Ah.15g091090 Amaranthus hybridus
AL2G23030 Arabidopsis lyrata
AL2G24320 Arabidopsis lyrata
AL2G24340 Arabidopsis lyrata
AL4G32580 Arabidopsis lyrata
AL4G32660 Arabidopsis lyrata
AL6G48390 Arabidopsis lyrata
Aqoxy2G01400 Aquilegia oxysepala
Aqoxy3G03046 Aquilegia oxysepala
Aqoxy4G01962 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.29YB95 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.2QY0R3 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.30LJXS Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.51BBIJ Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.62P0D6 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.6E3U4S Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.6E9CRB Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.8QT4MK Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.ER48TH Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.GMIT0H Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.H1KJG3 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.H8PMIE Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.I4EFYD Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.IR8K8V Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.J59CL2 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.M6EQ5Q Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.MWW1KH Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.N6R2CY Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.RQM33C Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.SPX7UV Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.SURN03 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.TD0XJJ Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.W23NDE Arachis hypogaea
AT1G66500 Arabidopsis thaliana
AT2G36480 Arabidopsis thaliana
AT4G04885 Arabidopsis thaliana
AT5G43620 Arabidopsis thaliana
ATR0752G038 Amborella trichopoda
ATR0820G114 Amborella trichopoda
Atru.chr10.2164 Acer truncatum
Atru.chr8.1632 Acer truncatum
Atru.chr8.1633 Acer truncatum
AUR62012664 Chenopodium quinoa
AUR62021990 Chenopodium quinoa
AUR62033577 Chenopodium quinoa
AUR62041422 Chenopodium quinoa
BcaB01g01843 Brassica carinata
BcaB03g15264 Brassica carinata
BcaB06g28948 Brassica carinata
BcaC02g07588 Brassica carinata
BcaC02g11764 Brassica carinata
BcaC04g21335 Brassica carinata
BcaC08g46050 Brassica carinata
BcaNung07060 Brassica carinata
BolC4t28030H Brassica oleracea
BolC6t39072H Brassica oleracea
BolC9t56139H Brassica oleracea
BraA05t19889Z Brassica rapa
BraA07t30971Z Brassica rapa
BraA09t38170Z Brassica rapa
C06p39840 Brassica napus
C09p33040 Brassica napus
CAN.G1138.18 Capsicum annuum
CAN.G208.5 Capsicum annuum
CAN.G824.30 Capsicum annuum
CANSAT35G2038 Cannabis sativa
CANSAT56G3099 Cannabis sativa
CARHR130780 Cardamine hirsuta
CARHR252670 Cardamine hirsuta
CARHR289580 Cardamine hirsuta
Carub.0002s1252 Capsella rubella
Carub.0004s1829 Capsella rubella
Carub.0006s3280 Capsella rubella
Ca_04267_v3 Cicer arietinum L.
Ca_08966_v3 Cicer arietinum L.
Cc02_g11540 Coffea canephora
Cc06_g05270 Coffea canephora
CDE02G0509 Ceratophyllum demersum
CDE02G0957 Ceratophyllum demersum
CDE05G3033 Ceratophyllum demersum
CDE05G3240 Ceratophyllum demersum
CDE11G0074 Ceratophyllum demersum
CDE11G0318 Ceratophyllum demersum
CDE11G0790 Ceratophyllum demersum
CDE11G0926 Ceratophyllum demersum
CDE11G1229 Ceratophyllum demersum
Cfa000259 Carpinus fangiana
Cfa016535 Carpinus fangiana
Ciclev10010952m.g Citrus clementina
Ciclev10014158m.g Citrus clementina
CiPaw.09G088600 Carya illinoinensis
CiPaw.10G005400 Carya illinoinensis
CiPaw.10G069000 Carya illinoinensis
ClCG03G002810 Citrullus lanatus
ClCG10G019340 Citrullus lanatus
COL.COLO4_28684 Corchorus olitorius
COL.COLO4_29814 Corchorus olitorius
Cpa.g.sc116.22 Carica papaya
Cpa.g.sc198.19 Carica papaya
Cpa.g.sc5.76 Carica papaya
Cre06.g265602 Chlamydomonas reinhardtii
CsaV3_1G013590 Cucumis sativus L.
CsaV3_3G036850 Cucumis sativus L.
CSS0041158 Camellia sinensis var. sinensis
DCAR_008129 Daucus carota
DCAR_020777 Daucus carota
Dinv17823 Davidia involucrata
Dinv19829 Davidia involucrata
Dinv20029 Davidia involucrata
Dinv21254 Davidia involucrata
Dinv21255 Davidia involucrata
Duzib093G1244 Durio zibethinus
Duzib106G1187 Durio zibethinus
Duzib160G0395 Durio zibethinus
Duzib192G0636 Durio zibethinus
Duzib235G1035 Durio zibethinus
ECA233G1602 Erigeron canadensis
ECA236G1956 Erigeron canadensis
EL10Ac1g00349 Beta vulgaris
EL10Ac7g16990 Beta vulgaris
EL10Ac8g20009 Beta vulgaris
Eucgr.A01542 Eucalyptus grandis
Eucgr.D01301 Eucalyptus grandis
FAN02G1270 Fragaria x ananassa
FAN05G2648 Fragaria x ananassa
FAN05G3351 Fragaria x ananassa
FAN09G1993 Fragaria x ananassa
FAN14G0343 Fragaria x ananassa
FAN19G1198 Fragaria x ananassa
FAN21G2529 Fragaria x ananassa
FAN25G1704 Fragaria x ananassa
FvH4_1g20911 Fragaria vesca
FvH4_3g02510 Fragaria vesca
FvH4_6g17910 Fragaria vesca
Glyma.03G191200 Glycine max
Glyma.10G066300 Glycine max
Glyma.10G251100 Glycine max
Glyma.10G251200 Glycine max
Glyma.19G191800 Glycine max
Glyma.19G191900 Glycine max
Glyma.20G142300 Glycine max
Glyma.20G142400 Glycine max
Glyma.20G142500 Glycine max
Gohir.A04G066000 Gossypium hirsutum
Gohir.A04G066100 Gossypium hirsutum
Gohir.A04G066200 Gossypium hirsutum
Gohir.A06G146700 Gossypium hirsutum
Gohir.D04G104060 Gossypium hirsutum
Gohir.D04G104072 Gossypium hirsutum
Gohir.D04G104084 Gossypium hirsutum
Gohir.D04G104100 Gossypium hirsutum
Gohir.D04G104200 Gossypium hirsutum
Gohir.D04G104300 Gossypium hirsutum
Gohir.D06G152500 Gossypium hirsutum
Gorai.009G407700 Gossypium raimondii
Gorai.009G407800 Gossypium raimondii
Gorai.009G408100 Gossypium raimondii
Gorai.010G178200 Gossypium raimondii
GSVIVG01012646001 Vitis vinifera
GSVIVG01033783001 Vitis vinifera
HanXRQChr02g0052321 Helianthus annuus
HanXRQChr05g0129881 Helianthus annuus
HanXRQChr06g0183011 Helianthus annuus
Haze_06757 Corylus avellana
Haze_06765 Corylus avellana
Haze_19539 Corylus avellana
Haze_19540 Corylus avellana
Hma1.2p1_0084F.1_g043230 Hydrangea macrophylla
Hma1.2p1_0084F.1_g043240 Hydrangea macrophylla
Hma1.2p1_0611F.1_g188670 Hydrangea macrophylla
Hma1.2p1_0813F.1_g222550 Hydrangea macrophylla
HPP92_002200 Vanilla planifolia
HPP92_002201 Vanilla planifolia
HPP92_026549 Vanilla planifolia
HPP92_027324 Vanilla planifolia
Hund19276 Selenicereus undatus
Hund21383 Selenicereus undatus
Lalb_Chr01g0018321 Lupinus albus
Lalb_Chr02g0144641 Lupinus albus
Lalb_Chr04g0257871 Lupinus albus
Lalb_Chr06g0164831 Lupinus albus
Lalb_Chr06g0173351 Lupinus albus
Lalb_Chr21g0315651 Lupinus albus
Lalb_Chr25g0288661 Lupinus albus
Lalb_Chr25g0288671 Lupinus albus
Lalb_Chr25g0288681 Lupinus albus
Lj1g0009790 Lotus japonicus
Lj1g0019790 Lotus japonicus
Lj1g0023296 Lotus japonicus
Lj2A129T53 Lonicera japonica
Lj2A271G35 Lonicera japonica
Lj2A596G37 Lonicera japonica
Lj2P271T32 Lonicera japonica
Lj5g0024745 Lotus japonicus
Lsat_1_v5_gn_2_21361 Lactuca sativa
Lsat_1_v5_gn_6_27120 Lactuca sativa
Lsat_1_v5_gn_7_17321 Lactuca sativa
Manes.08G021000 Manihot esculenta
Manes.09G058984 Manihot esculenta
Manes.09G059244 Manihot esculenta
Manes.17G036600 Manihot esculenta
Mapoly0131s0010 Marchantia polymorpha
MBI01_g04631_MAGBIO Magnolia biondii
MBI02_g15270_MAGBIO Magnolia biondii
MD02G1287400 Malus domestica
MD05G1342300 Malus domestica
MD10G1315900 Malus domestica
MD12G1018100 Malus domestica
MD14G1016100 Malus domestica
Medtr1g061130 Medicago truncatula
Medtr4g073340 Medicago truncatula
Medtr6g011450 Medicago truncatula
Medtr6g011470 Medicago truncatula
Medtr7g103840 Medicago truncatula
MELO3C004944.2 Cucumis melo
MELO3C009434.2 Cucumis melo
Migut.L01755 Erythranthe guttata
Migut.L01804 Erythranthe guttata
Migut.N02782 Erythranthe guttata
MSTRG.10351 Avicennia marina
MSTRG.19231 Avicennia marina
MSTRG.22220 Avicennia marina
MSTRG.24375 Avicennia marina
Nitab4.5_0000663g0120 Nicotiana tabacum
Nitab4.5_0000699g0210 Nicotiana tabacum
Nitab4.5_0002461g0070 Nicotiana tabacum
Nitab4.5_0006360g0030 Nicotiana tabacum
Nitab4.5_0007869g0010 Nicotiana tabacum
Nn1g03599 Nelumbo nucifera
Nn1g04730 Nelumbo nucifera
Nn1g07073 Nelumbo nucifera
Nn2g14002 Nelumbo nucifera
Nn6g35043 Nelumbo nucifera
Oeu002726.2 Olea europaea
Oeu015728.1 Olea europaea
Oeu033202.1 Olea europaea
Oeu033333.1 Olea europaea
Oeu033888.1 Olea europaea
Oeu039828.1 Olea europaea
Os08g0187700 Oryza sativa ssp. japonica
Os09g0566100 Oryza sativa ssp. japonica
Peaxi162Scf00064g00099 Petunia axillaris
Peaxi162Scf00110g02025 Petunia axillaris
Peaxi162Scf00433g00028 Petunia axillaris
PGR004G2327 Punica granatum
PGR031G0709 Punica granatum
PGR042G3555 Punica granatum
PGSC0003DMG400002717 Solanum tuberosum
PGSC0003DMG400029413 Solanum tuberosum
Phvul.001G186700 Phaseolus vulgaris
Phvul.007G053300 Phaseolus vulgaris
Phvul.007G053400 Phaseolus vulgaris
Phvul.007G223200 Phaseolus vulgaris
Potri.004G020300 Populus trichocarpa
Potri.006G115600 Populus trichocarpa
Potri.007G134000 Populus trichocarpa
Potri.011G024800 Populus trichocarpa
Potri.017G017800 Populus trichocarpa
Pp3c16_6360 Physcomitrium patens
Pp3c16_6390 Physcomitrium patens
PRCOL_00006154 Prasinoderma coloniale
Prupe.4G024700 Prunus persica
Prupe.7G117000 Prunus persica
Psat1g074640 Pisum sativum
Psat3g036120 Pisum sativum
Psat6g214080 Pisum sativum
Psat7g007400 Pisum sativum
Psat7g234000 Pisum sativum
PSO210G0494 Papaver somniferum
PSO339G3657 Papaver somniferum
PSO384G1689 Papaver somniferum
PSO832G3539 Papaver somniferum
QL05p074614 Quercus lobata
QL07p040525 Quercus lobata
QL93p0196_0020 Quercus lobata
RcHm_v2.0_Chr2g0114011 Rosa chinensis
RcHm_v2.0_Chr3g0472161 Rosa chinensis
RcHm_v2.0_Chr5g0003821 Rosa chinensis
Rhsim04G0135800 Rhododendron simsii
Rhsim13G0156600 Rhododendron simsii
Sabra04G0011200 Salix brachista
Sabra06G0090400 Salix brachista
Sabra07G0108800 Salix brachista
Sabra07G0121100 Salix brachista
Sabra11G0015500 Salix brachista
Sabra11G0021200 Salix brachista
Sabra17G0002600 Salix brachista
Sabra17G0002700 Salix brachista
Sabra17G0003300 Salix brachista
Sabra17G0003500 Salix brachista
Sabra17G0004100 Salix brachista
Sabra17G0004400 Salix brachista
Sabra17G0004600 Salix brachista
Sabra17G0013900 Salix brachista
SalBow2G0221 Salvia bowleyana
SalBow5G3297 Salvia bowleyana
Sc17g0007200 Simmondsia chinensis
Sc20g0006060 Simmondsia chinensis
Sed0013587 Sechium edule
Sed0017154 Sechium edule
Sed0019451 Sechium edule
Sed0026699 Sechium edule
SEGI_05452 Sequoiadendron giganteum
SEGI_20968 Sequoiadendron giganteum
SEGI_37894 Sequoiadendron giganteum
SGA_v2.0_scaffold184G39925 Striga asiatica
SHI02176 Sapria himalayana
SHI02177 Sapria himalayana
SHI23890 Sapria himalayana
SHI23891 Sapria himalayana
SMO358G0527 Selaginella moellendorffii
Solyc09g009120.4 Solanum lycopersicum
Solyc10g083590.2 Solanum lycopersicum
Solyc12g094490.2 Solanum lycopersicum
Sopen09g003830 Solanum pennellii
Sopen10g033070 Solanum pennellii
Sopen12g031380 Solanum pennellii
Sp4g18780 Schrenkiella parvula
Sp5g21550 Schrenkiella parvula
Sp6g04080 Schrenkiella parvula
TAR623G1555 Trochodendron aralioides
TAR624G1251 Trochodendron aralioides
TAR626G1780 Trochodendron aralioides
TAR627G0050 Trochodendron aralioides
TAR627G0851 Trochodendron aralioides
TAR633G1369 Trochodendron aralioides
TAR636G0273 Trochodendron aralioides
THA.LOC104805097 Tarenaya hassleriana
THA.LOC104812944 Tarenaya hassleriana
THA.LOC104822429 Tarenaya hassleriana
THA.LOC104824534 Tarenaya hassleriana
Thecc.05G081200 Theobroma cacao
Thecc.05G157200 Theobroma cacao
Thecc.05G157300 Theobroma cacao
Thecc.06G216100 Theobroma cacao
Thhalv10016259m.g Eutrema salsugineum
Thhalv10018488m.g Eutrema salsugineum
Thhalv10028426m.g Eutrema salsugineum
TPR.G10248 Trifolium pratense
TPR.G11400 Trifolium pratense
TPR.G4288 Trifolium pratense
TPR.G6830 Trifolium pratense
TPR.G6842 Trifolium pratense
TWI38G0154 Tripterygium wilfordii
TWI38G0788 Tripterygium wilfordii
TWI63G1360 Tripterygium wilfordii
TWI74G1101 Tripterygium wilfordii
TWI77G0181 Tripterygium wilfordii
unitig_0.g1047 Utricularia gibba
unitig_0.g1048 Utricularia gibba
unitig_749.g14287 Utricularia gibba
unitig_749.g14288 Utricularia gibba
vmacro03698 Vaccinium macrocarpon
vmacro08816 Vaccinium macrocarpon
VMungo0720G0181 Vigna mungo
VMungo0720G0417 Vigna mungo
VMungo0720G1492 Vigna mungo
VMungo0720G2356 Vigna mungo
VMungo1383G2052 Vigna mungo
Zm00001eb096100 Zea mays
Zm00001eb171710 Zea mays
Zm00001eb308220 Zea mays
Zm00001eb413150 Zea mays

User provided reference genes

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