Gene: PGR031G0709
General Information
Structural Information
- Species Punica granatum
- Gene Identifier PGR031G0709
- Transcript Identifier PGR031G0709.01
- Gene Type Coding gene
- Location NC_045127.1 : 5842646-5845281 : positive
Gene Family Information
- ID HOM05D001701
- #Genes/#Species 381/98
- Phylogenetic origin
- ID ORTHO05D001628
- #Genes/#Species 379/98
- Phylogenetic origin
Gene Duplication Information
Labels
Identifiers
- pid XP_031377764.1
- name LOC116193134
- name XM_031521904.1
- id gene-LOC116193134
- uniprot A0A6P8C4W2
Descriptions
- product polyadenylation and cleavage factor homolog 4-like, transcript variant X1
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0006369 | IEA | GOA Database | termination of RNA polymerase II transcription | |
| GO:0006369 | IEA | InterPro | termination of RNA polymerase II transcription | |
| GO:0006378 | IEA | GOA Database | mRNA polyadenylation | |
| GO:0006378 | IEA | InterPro | mRNA polyadenylation | |
| GO:0006379 | IEA | GOA Database | mRNA cleavage | |
| GO:0006379 | IEA | InterPro | mRNA cleavage | |
| GO:0006397 | ISO | PLAZA Integrative Orthology | mRNA processing | AT4G04885 |
| GO:0009911 | ISO | PLAZA Integrative Orthology | positive regulation of flower development | AT4G04885 |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0000993 | IEA | GOA Database | RNA polymerase II complex binding | |
| GO:0000993 | IEA | InterPro | RNA polymerase II complex binding | |
| GO:0003729 | IEA | GOA Database | mRNA binding | |
| GO:0003729 | IEA | InterPro | mRNA binding | |
| GO:0005515 | ISO | PLAZA Integrative Orthology | protein binding | AT4G04885 |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005634 | ISO | PLAZA Integrative Orthology | nucleus | AT4G04885 |
| GO:0005737 | ISO | PLAZA Integrative Orthology | cytoplasm | AT4G04885 |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| InterPro | Description |
|---|---|
| IPR045154 | Protein PCF11-like |
| Mapman id | Description |
|---|---|
| 16.3.1.5.2 | RNA processing.RNA 3'-end processing.mRNA polyadenylation.Cleavage Factor II (CF-IIm) complex.component Pcf11 |